Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4934 |
Symbol | glyS |
ID | 6970455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4571603 |
End bp | 4573672 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643388617 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_002273044 |
Protein GI | 209399717 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.711684 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAGA AAACTTTTCT GGTGGAAATC GGCACTGAAG AGCTGCCACC AAAAGCACTG CGCAGCCTGG CAGAGTCCTT TGCTGCGAAC TTTACTGCGG AGCTGGATAA CGCAGGCCTC GCACACGGCA CCGTTCAATG GTTTGCTGCT CCGCGTCGTC TGGCGCTGAA AGTAGCTAAC CTGGCGGAAG CGCAACCGGA TCGTGAAATC GAAAAACGCG GCCCGGCGAT TGCCCAGGCG TTCGACGCTG AAGGCAAACC GAGCAAAGCG GCAGAAGGTT GGGCGCGTGG TTGCGGTATT ACCGTTGACC AGGCTGAGCG TCTGACTACC GATAAAGGCG AATGGCTGCT GTATCGCGCC CATGTGAAGG GCGAAAGCAC TGAAGCACTG CTGCCGAATA TGGTTGCGAC TTCGCTGGCG AAACTGCCGA TTCCGAAACT GATGCGCTGG GGTGCAAGCG ACGTGCACTT CGTGCGTCCG GTGCACACCG TGACCCTGCT GCTGGGCGAC AAAGTCATTC CTGCAACCAT TCTGGGCATT CAGTCCGATC GCGTGATTCG CGGCCACCGC TTTATGGGCG AGCCGGAATT CACCATCGAT AACGCCGATC AGTATCCGGA AATTCTGCGT GAGCGTGGGA AAGTCATCGC CGATTACGAA GAACGTAAGG CGAAGATTAA AGCCGATGCC GAAGAAGCAG CGCGTAAGAT TGGCGGTAAC GCTGACTTAA GCGAAAGCCT GCTGGAAGAA GTGGCTTCGC TGGTGGAGTG GCCGGTCGTT CTAACCGCGA AATTTGAAGA GAAATTCCTC GCGGTGCCGT CTGAAGCACT GGTTTACACC ATGAAAGGTG ACCAGAAGTA CTTCCCGGTG TATGCGAACG ACGGCAAACT GCTGCCGAAC TTTATCTTCG TTGCCAACAT CGAATCGAAA GATCCGCAGC AAATTATCTC TGGTAACGAG AAAGTCGTTC GTCCACGTCT GGCTGATGCC GAGTTCTTCT TCAACACCGA CCGTAAAAAA CGTCTGGAAG ATAACCTGCC GCGCCTGCAA ACCGTGCTGT TCCAGCAACA GCTGGGTACG CTGCGTGACA AGACTGACCG CATCCAGGCG CTGGCTGGCT GGATCGCCGA ACAGATTGGC GCTGACGTTA ACCACGCAAC CCGTGCGGGC CTGCTGTCTA AGTGTGACCT GATGACCAAC ATGGTCTTCG AGTTCACCGA CACCCAAGGC GTTATGGGGA TGCACTACGC GCGTCACGAT GGCGAAGCGG AAGACGTAGC CGTCGCGCTG AATGAGCAGT ATCAGCCGCG CTTTGCCGGT GATGACCTGC CGTCCAACCC GGTAGCTTGT GCGCTGGCGA TTGCTGATAA GATGGATACT CTGGCGGGTA TCTTCGGTAT CGGTCAGCAT CCGAAAGGCG ACAAAGACCC GTTTGCGCTG CGTCGTGCCG CACTTGGCGT GCTGCGAATT ATCGTTGAGA AGAACCTCAA CCTTGATCTG CAAACGCTGA CCGAAGAAGC GGTGCGTCTG TATGGCGATA AGCTGACTAA TGCCAACGTA GTTGATGATG TTATCGACTT TATGCTCGGT CGCTTCCGCG CCTGGTATCA GGACGAAGGT TATACCGTTG ACACCATCCA GGCGGTACTG GCGCGTCGTC CGACTCGTCC GGCTGATTTC GATGCCCGCA TGAAAGCGGT ATCGCACTTC CGTACCCTGG AAGCAGCTGC AGCACTGGCG GCGGCGAACA AACGTGTATC TAACATCCTG GCGAAATCTG ACGAAGTGCT GAGCGATCGC GTGAATGCCT CTACTCTGAA AGAGCCGGAA GAAATTAAAC TGGCGATGCA GGTTGTGGTG CTACGTGACA AGCTGGAGCC GTACTTTGCG GAAGGTCGTT ACCAGGATGC GCTGGTCGAA CTGGCAGAGC TGCGTGAACC AGTCGATGCC TTCTTCGATA AAGTGATGGT CATGGTTGAT GACAAAGAAT TGCGTATCAA CCGTCTGACC ATGCTGGAGA AACTGCGCGA ACTGTTCCTG CGCGTTGCGG ATATTTCGCT GTTGCAGTAA
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Protein sequence | MSEKTFLVEI GTEELPPKAL RSLAESFAAN FTAELDNAGL AHGTVQWFAA PRRLALKVAN LAEAQPDREI EKRGPAIAQA FDAEGKPSKA AEGWARGCGI TVDQAERLTT DKGEWLLYRA HVKGESTEAL LPNMVATSLA KLPIPKLMRW GASDVHFVRP VHTVTLLLGD KVIPATILGI QSDRVIRGHR FMGEPEFTID NADQYPEILR ERGKVIADYE ERKAKIKADA EEAARKIGGN ADLSESLLEE VASLVEWPVV LTAKFEEKFL AVPSEALVYT MKGDQKYFPV YANDGKLLPN FIFVANIESK DPQQIISGNE KVVRPRLADA EFFFNTDRKK RLEDNLPRLQ TVLFQQQLGT LRDKTDRIQA LAGWIAEQIG ADVNHATRAG LLSKCDLMTN MVFEFTDTQG VMGMHYARHD GEAEDVAVAL NEQYQPRFAG DDLPSNPVAC ALAIADKMDT LAGIFGIGQH PKGDKDPFAL RRAALGVLRI IVEKNLNLDL QTLTEEAVRL YGDKLTNANV VDDVIDFMLG RFRAWYQDEG YTVDTIQAVL ARRPTRPADF DARMKAVSHF RTLEAAAALA AANKRVSNIL AKSDEVLSDR VNASTLKEPE EIKLAMQVVV LRDKLEPYFA EGRYQDALVE LAELREPVDA FFDKVMVMVD DKELRINRLT MLEKLRELFL RVADISLLQ
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