Gene ECH74115_4885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4885 
Symbol 
ID6967222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4518576 
End bp4519589 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content53% 
IMG OID643388573 
Productputative ribonuclease 
Protein accessionYP_002273001 
Protein GI209396850 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN)
[TIGR00766] ribonuclease, putative 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGG AAAACGAGAT CAAACGTCCC ACCCAGGATC TGGAGCACGA GCCGATTAAG 
CAGTTGGATA ATAGCGAGAA AGGCGGCAAA GTTAGCCAGG CGCTGGAAAC CGTCACCACC
ACTGCCGAAA AAGTCCAACG CCAACCGGTT ATTGCGCACC TGATTCGCGC GACAGAACGC
TTTAACGATC GGCTGGGTAA CCAGTTTGGT GCGGCTATCA CCTATTTCTC ATTTTTGTCG
ATGATCCCGA TTTTGATGGT GTCGTTTGCC GCAGGGGGCT TTGTGCTGGC CTCCCATCCG
ATGTTGCTAC AGGATATCTT CGACAAAATT CTGCAAAACA TCAGCGATCC GACGCTAGCC
GCTACGTTGA AAAACACCAT CAACACCGCC GTTCAGCAGC GTACGACTGT AGGGCTTGTC
GGCCTGGCGG TGGCGCTTTA TTCCGGCATC AACTGGATGG GTAACCTGCG TGAAGCGATT
CGTGCCCAGT CGCGCGATGT CTGGGAACGC TCGCCGCAAG ATCAGGAGAA GTTCTGGGTA
AAATATCTGC GTGATTTTAT TTCGCTGATT GGTTTGTTGA TTGCGCTGAT TGTGACGCTT
TCGATCACCT CGGTTGCCGG TTCGGCGCAG CAAATGATTA TTAGCGCCCT GCACCTGAAC
AGCATTGAGT GGCTGAAACC GACGTGGCGG TTGATTGGCC TGGCGATTTC CATCTTCGCC
AACTATCTGC TTTTCTTCTG GATCTTCTGG CGGTTGCCGC GCCACCGTCC GCGCAAAAAA
GCCCTGATTC GCGGAACATT TCTGGCTGCT ATTGGTTTTG AAGTGATTAA AATCGTGATG
ACCTACACCC TGCCATCGTT GATGAAATCC CCCTCTGGCG CAGCATTTGG TTCCGTGCTG
GGGCTGATGG CATTTTTCTA CTTCTTCGCC CGTTTGACGC TGTTTTGCGC GGCGTGGATT
GCCACCGCCG AATATAAAGA CGACCCGCGA ATGCCGGGGA AAACGCAGCC TTAA
 
Protein sequence
MTQENEIKRP TQDLEHEPIK QLDNSEKGGK VSQALETVTT TAEKVQRQPV IAHLIRATER 
FNDRLGNQFG AAITYFSFLS MIPILMVSFA AGGFVLASHP MLLQDIFDKI LQNISDPTLA
ATLKNTINTA VQQRTTVGLV GLAVALYSGI NWMGNLREAI RAQSRDVWER SPQDQEKFWV
KYLRDFISLI GLLIALIVTL SITSVAGSAQ QMIISALHLN SIEWLKPTWR LIGLAISIFA
NYLLFFWIFW RLPRHRPRKK ALIRGTFLAA IGFEVIKIVM TYTLPSLMKS PSGAAFGSVL
GLMAFFYFFA RLTLFCAAWI ATAEYKDDPR MPGKTQP