| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4816 |
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| Symbol | nikA |
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| ID | 6967632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4451349 |
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| End bp | 4452923 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643388508 |
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| Product | nickel ABC transporter, periplasmic nickel-binding protein NikA |
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| Protein accession | YP_002272936 |
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| Protein GI | 209399938 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCCA CACTCCGCCG CACTCTATTT GCGCTGCTGG CTTGTGCGTC TTTTATCGTC
CATGCCGCTG CACCAGATGA AATCACCACC GCCTGGCCGG TGAATGTCGG GCCACTAAAC
CCGCACCTTT ACACGCCTAA CCAGATGTTC GCCCAGAGCA TGGTTTATGA ACCATTGGTG
AAATATCAGG CAGACGGTTC GGTGATCCCG TGGCTGGCAA AAAGCTGGAC TCATTCAGAA
GATGGTAAAA CCTGGACCTT CACCCTGCGT GATGACGTGA AATTCTCTAA CGGCGAACCG
TTTGATGCAG AGGCGGCGGC AGAAAACTTC CGCGCAGTGC TCGATAACCG TCAACGTCAC
GCCTGGCTGG AGCTGGCAAA CCAGATTGTT GATGTTAAAG CACTCAGTAA AACAGAGCTG
CAAATCACCC TGAAAAGCGC CTACTATCCT TTCCTGCAAG AACTGGCCCT GCCGCGCCCT
TTCCGCTTTA TCGCCCCCTC GCAGTTTAAA AACCATGAAA CCATGAACGG GATTAAAGCG
CCGATTGGCA CCGGACCGTG GGTTTTGCAG GAATCGAAAC TGAATCAGTA CGATGTCTTC
GTCCGTAACG AAAACTACTG GGGCGAAAAG CCGGCAATTA AGAAGATCAC TTTTAACGTC
ATCCCAGACC CGACTACCCG CGCGGTGGCG TTTGAAACTG GCGATATCGA CCTGCTGTAC
GGAAACGAAG GGTTATTACC GCTCGATACC TTCGCCCGCT TTAGCCAGAA CCCGGCTTAC
CATACCCAAC TGTCACAGCC GATCGAAACC GTGATGCTGG CGCTTAATAC CGCCAAAGCC
CCCACCAATG AGCTGGCAGT ACGTGAAGCT CTTAATTACG CGGTAAACAA AAAATCGCTG
ATTGATAACG CGTTGTATGG CACCCAGCAG GTCGCCGACA CCCTGTTTGC CCCTTCTGTG
CCCTACGCCA ACCTCGGCCT GAAACCGCGC CAGTACGATC CGCAGAAAGC GAAAGCGTTG
CTGGAAAAAG CCGGTTGGAC GCTGCCTGCG GGCAAAGACA TCCGCGAGAA AAATGGTCAG
CCGCTGCACA TTGAACTTTC GTTCATCGGC ACCGATGCGT TAAGCAAATC GATGGCGGAA
ATCATTCAGG CTGATATGCG CCAGATTGGC GCAGATGTCT CGCTGATTGG CGAAGAAGAG
AGCAGTATCT ATGCGCGTCA GCGCGACGGT CGTTTTGGCA TGATTTTCCA CCGCACCTGG
GGCGCGCCAT ACGATCCACA CGCCTTCCTG AGTTCAATGC GCGTACCGTC GCACGCTGAC
TTCCAGGCAC AGCAAGGATT AGCCGACAAG CCGCTGATTG ATAAAGAGAT CGGCGAAGTG
CTGGCGACCC ATGACGAAGC ACAACGTCAG GCACTGTATC GCGACATTCT GACCCGTCTG
CATGACGAGG CGGTTTATCT GCCTATCAGT TACATCTCAA TGATGGTGGT ATCAAAACCG
GAGCTGGGTA ACATCCCCTA CGCGCCGATC GCCACCGAAA TTCCGTTCGA ACAGATTAAA
CCGGTGAAAC CTTAA
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| Protein sequence | MLSTLRRTLF ALLACASFIV HAAAPDEITT AWPVNVGPLN PHLYTPNQMF AQSMVYEPLV
KYQADGSVIP WLAKSWTHSE DGKTWTFTLR DDVKFSNGEP FDAEAAAENF RAVLDNRQRH
AWLELANQIV DVKALSKTEL QITLKSAYYP FLQELALPRP FRFIAPSQFK NHETMNGIKA
PIGTGPWVLQ ESKLNQYDVF VRNENYWGEK PAIKKITFNV IPDPTTRAVA FETGDIDLLY
GNEGLLPLDT FARFSQNPAY HTQLSQPIET VMLALNTAKA PTNELAVREA LNYAVNKKSL
IDNALYGTQQ VADTLFAPSV PYANLGLKPR QYDPQKAKAL LEKAGWTLPA GKDIREKNGQ
PLHIELSFIG TDALSKSMAE IIQADMRQIG ADVSLIGEEE SSIYARQRDG RFGMIFHRTW
GAPYDPHAFL SSMRVPSHAD FQAQQGLADK PLIDKEIGEV LATHDEAQRQ ALYRDILTRL
HDEAVYLPIS YISMMVVSKP ELGNIPYAPI ATEIPFEQIK PVKP
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