| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4781 |
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| Symbol | rpoH |
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| ID | 6970923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4422253 |
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| End bp | 4423107 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643388477 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_002272905 |
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| Protein GI | 209398124 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGACA AAATGCAAAG TTTAGCTTTA GCCCCAGTTG GCAACCTGGA TTCCTACATC
CGGGCAGCTA ACGCGTGGCC GATGTTGTCG GCTGACGAGG AGCGGGCGCT GGCTGAAAAG
CTGCATTACC ATGGCGATCT GGAAGCAGCT AAAACGCTGA TCCTGTCTCA CCTGCGGTTT
GTTGTTCATA TTGCTCGTAA TTATGCGGGC TATGGCCTGC CACAGGCGGA TTTGATTCAG
GAAGGTAACA TCGGCCTGAT GAAAGCAGTG CGCCGTTTTA ACCCGGAAGT GGGTGTGCGC
CTGGTCTCCT TCGCCGTCCA CTGGATCAAA GCAGAGATCC ACGAATACGT TCTGCGTAAC
TGGCGTATCG TCAAAGTTGC GACCACCAAA GCGCAGCGCA AACTGTTCTT CAACCTGCGT
AAAACCAAGC AGCGTCTGGG CTGGTTTAAC CAGGATGAAG TCGAAATGGT GGCCCGTGAA
CTGGGCGTAA CCAGCAAAGA CGTACGTGAG ATGGAATCAC GTATGGCGGC ACAGGACATG
ACCTTTGACC TGTCTTCCGA CGACGATTCC GACAGCCAAC CGATGGCACC GGTGCTCTAT
CTGCAGGATA AATCATCTAA CTTTGCCGAC GGCATTGAAG ATGATAACTG GGAAGAGCAG
GCAGCAAACC GTCTGACCGA CGCGATGCAG GGTCTGGACG AACGCAGCCA GGACATCATC
CGTGCGCGCT GGCTGGACGA AGACAACAAG TCCACGTTGC AGGAACTGGC TGACCGTTAC
GGTGTTTCCG CTGAGCGTGT GCGCCAGCTG GAAAAGAACG CGATGAAAAA ACTGCGCGCT
GCTATAGAAG CGTAA
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| Protein sequence | MTDKMQSLAL APVGNLDSYI RAANAWPMLS ADEERALAEK LHYHGDLEAA KTLILSHLRF
VVHIARNYAG YGLPQADLIQ EGNIGLMKAV RRFNPEVGVR LVSFAVHWIK AEIHEYVLRN
WRIVKVATTK AQRKLFFNLR KTKQRLGWFN QDEVEMVARE LGVTSKDVRE MESRMAAQDM
TFDLSSDDDS DSQPMAPVLY LQDKSSNFAD GIEDDNWEEQ AANRLTDAMQ GLDERSQDII
RARWLDEDNK STLQELADRY GVSAERVRQL EKNAMKKLRA AIEA
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