| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4668 |
|---|
| Symbol | |
|---|
| ID | 6969052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 4309789 |
|---|
| End bp | 4311879 |
|---|
| Gene Length | 2091 bp |
|---|
| Protein Length | 696 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643388372 |
|---|
| Product | integral membrane protein, YccS/YhfK family |
|---|
| Protein accession | YP_002272800 |
|---|
| Protein GI | 209397460 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01667] integral membrane protein, YccS/YhfK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0557749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.293941 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCGCA GACTGATTTA TCACCCCGAT ATTAACTATG CACTGCGACA AACGCTGGTG
CTATGTTTGC CCGTGGCCGT TGGGTTAATG CTTGGCGAAT TACGATTCGG TCTGCTCTTC
TCTCTCGTTC CTGCCTGTTG CAATATTGCG GGCCTTGATA CGCCTCATAA ACGTTTTTTC
AAACGCTTAA TCATTGGTGC GTCGCTGTTT GCCACCTGTA GCTTACTGAC ACAGCTGCTA
CTGGCAAAAG ATGTTCCCCT GCCTTTTTTG CTGACCGGAT TAACGCTGGT ACTTGGCGTC
ACTGCTGAGT TGGGGCCATT GCACGCAAAA TTGCTTCCCG CATCGCTGCT GGCAGCCATT
TTTACCCTCA GTCTGGCGGG ATACATGCCG GTCTGGGAAC CGTTGCTCAT CTATGCGTTG
GGCACTCTCT GGTACGGATT GTTTAACTGG TTTTGGTTCT GGATCTGGCG CGAACAACCG
CTGCGCGAGT CACTAAGTCT GCTGTACCGT GAACTGGCAG ATTATTGTGA AGCCAAATAC
AGCCTGCTTA CCCAGCACAC CGACCCTGAA AAAGCGCTGC CGCCGCTGCT GGTGCGCCAG
CAAAAAGCGG TCGATCTAAT TACCCAGTGC TATCAGCAAA TGCATATGCT TTCCGCGCAA
AATAATACTG ACTACAAGCG GATGCTGCGT ATTTTCCAGG AGGCGCTGGA TTTACAGGAA
CATATTTCGG TCAGTTTGCA TCAGCCGGAA GAGGTGCAAA AGCTGGTCGA GCGTAGCCAT
GCGGAAGAAG TTATCCGCTG GAATGCGCAA ACCGTCGCCG CTCGCCTGCG CGTGCTGGCT
GATGACATTC TTTACCATCG CCTGCCGACG CGTTTTACGA TGGAAAAGCA AATTGGCGCA
CTGGAAAAAA TCGCCCGCCA GCATCCGGAT AATCCGGTTG GGCAATTCTG CTATTGGCAC
TTCAGCCGCA TCGCCCGCGT GCTGCGCACC CAAAAACCGC TCTATGCCCG TGACTTACTG
GCCGATAAAC AGCGGCGAAT GCCGTTACTT CCGGCGCTGA AAAGTTATTT GTCACTAAAG
TCTCCGGCGC TACGCAATGC CGGACGACTC AGTGTGATGT TAAGCGTTGC CAGCTTGATG
GGCACCGCGC TGCATCTGCC GAAGTCGTAC TGGATCCTGA TGACGGTATT GCTGGTGACG
CAAAATGGCT ATGGCGCAAC CCGTCTGAGG ATTGTGAATC GCTCCGTGGG AACCGTGGTC
GGGTTAATCA TTGCGGGCGT GGCGCTGCAC TTTAAAATTC CCGAAGGTTA CACCCTGACC
TTGATGCTGA TTACCACCCT TGCCAGCTAC CTGATATTGC GCAAAAACTA CGGCTGGGCG
ACGGTCGGTT TTACTATTAC CGCAGTGTAT ACCCTGCAAC TGTTGTGGCT GAACGGTGAG
CAGTACATCC TTCCGCGTCT TATCGATACC ATTATTGGTT GTTTAATTGC TTTCGGTGGT
ACCGTCTGGC TGTGGCCGCA GTGGCAGAGC GGGTTATTGC GTAAAAACGC CCATGACGCT
TTAGAAGCCT ATCAGGAAGC GATTCGCTTG ATTCTGAGCG AGGATCCGCA ACCAACGCCA
CTGGCCTGGC AGCGAATGCG GGTAAATCAG GCGCATAACA CTCTGTATAA CTCATTGAAT
CAGGCGATGC AGGAACCAGC GTTCAACAGC CATTATCTGG CAGATATGAA ACTGTGGGTA
ACGCACAGTC AGTTTATTGT TGAACATATT AATGCCATGA CCACGCTGGC GCGGGAACAC
CGGGCATTGC CACCTGAACT GGCACAAGAG TATTTACAGT CTTGTGAAAT CGCCATTCAG
CGTTGTCAGC AGCGACTGGA GTATGACGAA CCGGGTAGTT CTGGCGATGC CAATATCATG
GATGCGCCGG AGATGCAGCC GCACGAAGGC GCGGCAGGTA CGCTGGAGCA GCATTTACAG
CGGGTTATTG GTCATCTGAA CACCATGCAC ACCATTTCGT CGATGGCATG GCGTCAGCGA
CCGCATCACG GGATTTGGCT GAGTCGCAAG TTGCGGGATT CGAAGGCGTA A
|
|---|
| Protein sequence | MWRRLIYHPD INYALRQTLV LCLPVAVGLM LGELRFGLLF SLVPACCNIA GLDTPHKRFF
KRLIIGASLF ATCSLLTQLL LAKDVPLPFL LTGLTLVLGV TAELGPLHAK LLPASLLAAI
FTLSLAGYMP VWEPLLIYAL GTLWYGLFNW FWFWIWREQP LRESLSLLYR ELADYCEAKY
SLLTQHTDPE KALPPLLVRQ QKAVDLITQC YQQMHMLSAQ NNTDYKRMLR IFQEALDLQE
HISVSLHQPE EVQKLVERSH AEEVIRWNAQ TVAARLRVLA DDILYHRLPT RFTMEKQIGA
LEKIARQHPD NPVGQFCYWH FSRIARVLRT QKPLYARDLL ADKQRRMPLL PALKSYLSLK
SPALRNAGRL SVMLSVASLM GTALHLPKSY WILMTVLLVT QNGYGATRLR IVNRSVGTVV
GLIIAGVALH FKIPEGYTLT LMLITTLASY LILRKNYGWA TVGFTITAVY TLQLLWLNGE
QYILPRLIDT IIGCLIAFGG TVWLWPQWQS GLLRKNAHDA LEAYQEAIRL ILSEDPQPTP
LAWQRMRVNQ AHNTLYNSLN QAMQEPAFNS HYLADMKLWV THSQFIVEHI NAMTTLAREH
RALPPELAQE YLQSCEIAIQ RCQQRLEYDE PGSSGDANIM DAPEMQPHEG AAGTLEQHLQ
RVIGHLNTMH TISSMAWRQR PHHGIWLSRK LRDSKA
|
|---|
| |