Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4644 |
Symbol | rpsJ |
ID | 6970081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4291051 |
End bp | 4291362 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643388349 |
Product | 30S ribosomal protein S10 |
Protein accession | YP_002272777 |
Protein GI | 209399386 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0051] Ribosomal protein S10 |
TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000052499 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.0424233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAACC AAAGAATCCG TATCCGCCTG AAAGCGTTTG ATCATCGTCT GATCGATCAA GCAACCGCGG AAATCGTCGA GACTGCCAAG CGCACTGGTG CGCAGGTCCG TGGTCCGATC CCGCTGCCGA CACGCAAAGA GCGCTTCACT GTTCTGATCT CCCCGCACGT CAACAAAGAC GCGCGCGATC AGTACGAAAT CCGTACTCAC TTGCGTCTGG TTGACATCGT TGAGCCAACC GAGAAAACCG TTGATGCTCT GATGCGTCTG GATCTGGCTG CCGGTGTAGA CGTGCAGATC AGCCTGGGTT AA
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Protein sequence | MQNQRIRIRL KAFDHRLIDQ ATAEIVETAK RTGAQVRGPI PLPTRKERFT VLISPHVNKD ARDQYEIRTH LRLVDIVEPT EKTVDALMRL DLAAGVDVQI SLG
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