Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4509 |
Symbol | ispB |
ID | 6970655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4177829 |
End bp | 4178800 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643388222 |
Product | octaprenyl diphosphate synthase |
Protein accession | YP_002272657 |
Protein GI | 209396313 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000159787 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTAG AAAAAATCAA TGAGTTAACC GCGCAAGATA TGGCGGGTGT TAATGCGGCA ATCCTTGAGC AGCTTAATTC CGACGTCCAA CTGATCAATC AGTTAGGCTA TTACATCGTC AGCGGCGGCG GTAAACGTAT TCGTCCGATG ATTGCTGTAC TGGCTGCACG AGCTGTTGGC TATGAGGGAA ATGCGCATGT CACCATTGCT GCCCTGATCG AGTTTATCCA CACGGCGACT CTGCTGCACG ACGACGTTGT GGATGAATCA GATATGCGCA GGGGTAAAGC TACCGCCAAC GCCGCATTTG GCAATGCCGC CAGCGTGCTG GTAGGCGATT TTATTTATAC CCGCGCGTTC CAGATGATGA CCAGCCTCGG TTCACTCAAA GTGCTGGAAG TCATGTCAGA AGCCGTAAAC GTCATCGCAG AAGGTGAAGT TCTGCAACTG ATGAATGTTA ACGATCCGGA CATCACTGAA GAAAACTACA TGCGCGTTAT CTATAGCAAA ACCGCGCGTC TGTTTGAGGC TGCCGCGCAG TGTTCCGGAA TTCTGGCGGG CTGTACGCCG GAGGAGGAGA AAGGCCTGCA GGATTATGGG CGCTATCTCG GCACTGCTTT CCAGTTGATC GACGATTTAC TCGATTACAA TGCCGATGGC GAACAGTTAG GTAAAAACGT CGGCGACGAT CTGAACGAAG GTAAACCGAC GCTGCCGCTG CTGCATGCGA TGCATCATGG CACACCAGAA CAGGCACAGA TGATCCGTAC CGCCATCGAA CAGGGTAACG GTCGCCATCT TCTGAAACCG GTTCTGGAAG CAATGAACGC TTGTGGATCT CTTGAATGGA CGCGTCAGCG CGCCGAGGAA GAAGCAGACA AAGCCATCGC AGCGTTACAG GTGCTCCCGG ACACCCCTTG GCGAGAAGCA CTCATCGGCC TCGCGCACAT CGCTGTTCAA CGCGATCGTT AA
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Protein sequence | MNLEKINELT AQDMAGVNAA ILEQLNSDVQ LINQLGYYIV SGGGKRIRPM IAVLAARAVG YEGNAHVTIA ALIEFIHTAT LLHDDVVDES DMRRGKATAN AAFGNAASVL VGDFIYTRAF QMMTSLGSLK VLEVMSEAVN VIAEGEVLQL MNVNDPDITE ENYMRVIYSK TARLFEAAAQ CSGILAGCTP EEEKGLQDYG RYLGTAFQLI DDLLDYNADG EQLGKNVGDD LNEGKPTLPL LHAMHHGTPE QAQMIRTAIE QGNGRHLLKP VLEAMNACGS LEWTRQRAEE EADKAIAALQ VLPDTPWREA LIGLAHIAVQ RDR
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