| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4481 |
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| Symbol | deaD |
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| ID | 6970554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4150235 |
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| End bp | 4152124 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643388196 |
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| Product | ATP-dependent RNA helicase DeaD |
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| Protein accession | YP_002272633 |
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| Protein GI | 209400297 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAT TCGAAACCAC TTTTGCAGAT CTGGGCCTGA AGGCTCCTAT CCTTGAAGCC
CTTAACGATC TGGGTTACGA AAAACCATCT CCAATTCAGG CGGAGTGTAT TCCACATCTG
CTGAATGGCC GCGACGTACT GGGTATGGCC CAGACGGGGA GCGGAAAAAC TGCAGCATTC
TCTTTACCTC TGCTGCAAAA TCTTGATCCT GAGCTGAAAG CACCACAGAT TCTGGTGCTA
GCACCGACCC GCGAACTGGC GGTACAGGTT GCTGAAGCAA TGACGGATTT CTCTAAACAC
ATGCGCGGCG TAAATGTGGT TGCCCTGTAC GGCGGCCAGC GTTATGACGT GCAATTACGC
GCCCTGCGTC AGGGGCCGCA GATCGTTGTC GGTACTCCGG GCCGTCTGCT GGACCACCTG
AAACGTGGCA CTCTGGACCT CTCTAAACTG AGCGGTCTGG TTCTGGATGA AGCTGACGAA
ATGCTGCGCA TGGGCTTCAT CGAAGACGTT GAAACTATTA TGGCGCAGAT CCCGGAAGGT
CATCAGACCG CTCTGTTCTC TGCAACCATG CCGGAAGCGA TTCGTCGCAT TACCCGCCGC
TTTATGAAAG AGCCGCAGGA AGTGCGCATT CAGTCCAGCG TGACTACCCG TCCTGACATC
AGCCAGAGCT ATTGGACTGT CTGGGGTATG CGTAAAAACG AAGCACTGGT ACGTTTCCTG
GAAGCGGAAG ATTTTGATGC GGCGATTATC TTCGTTCGTA CCAAAAATGC GACTCTGGAA
GTGGCTGAAG CTCTTGAGCG TAACGGCTAC AACAGCGCCG CGCTGAACGG TGACATGAAC
CAGGCGCTGC GTGAGCAGAC ACTGGAACGC CTGAAAGATG GTCGTCTGGA CATCCTGATT
GCGACCGACG TTGCAGCCCG TGGCCTGGAC GTTGAGCGTA TCAGCCTGGT GGTTAACTAC
GATATCCCGA TGGATTCTGA GTCTTACGTT CACCGTATCG GTCGTACCGG TCGTGCGGGT
CGTGCTGGCC GCGCGCTGCT GTTCGTTGAG AACCGCGAGC GTCGTCTGCT GCGCAACATT
GAACGTACTA TGAAGCTGAC TATTCCGGAA GTAGAACTGC CGAACGCAGA ACTGCTGGGC
AAACGCCGTC TGGAAAAATT CGCCGCTAAA GTACAGCAGC AGCTGGAAAG CAGCGATCTG
GATCAATACC GCGCACTGCT GAGCAAAATT CAGCCGACTG CAGAAGGTGA AGAGCTGGAT
CTCGAAACTC TGGCCGCCGC ACTGCTGAAA ATGGCACAGG GTGAACGTAC TCTGATTGTT
CCGCCAGATG CGCCGATGCG TCCGAAACGT GAATTCCGTG ACCGTGATGA CCGTGGTCCG
CGCGATCGTA ACGACCGTGG TCCGCGTGGC GACCGTGAAG ATCGTCCGCG TCGTGAACGT
CGTGATGTTG GTGACATGCA GTTGTACCGT ATTGAAGTGG GCCGCGATGA TGGTGTTGAA
GTTCGTCATA TCGTTGGTGC GATTGCTAAC GAAGGCGACA TCAGCAGCCG TTACATCGGT
AACATTAAGC TGTTTGCTTC TCACTCCACC ATCGAACTGC CGAAAGGTAT GCCGGGTGAA
GTGCTGCAAC ACTTTACACG TACTCGCATT CTGAACAAGC CGATGAATAT GCAATTACTG
GGCGATGCAC AGCCGCATAC TGGCGGAGAG CGTCGTGGCG GTGGTCGTGG TTTCAGTGGC
GAGCGTCGTG AAGGTGGTCG TAACTTCAGC GGTGAACGCC GTGAAGGTGG TCGTGGTGAT
GGTCGTCGTT TTAGCGGCGA ACGTCGTGAA GGCCGCGCTC CGCGTCGTGA TGACTCTACC
GGTCGTCGTC GTTTCGGTGG TGATGCGTAA
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| Protein sequence | MAEFETTFAD LGLKAPILEA LNDLGYEKPS PIQAECIPHL LNGRDVLGMA QTGSGKTAAF
SLPLLQNLDP ELKAPQILVL APTRELAVQV AEAMTDFSKH MRGVNVVALY GGQRYDVQLR
ALRQGPQIVV GTPGRLLDHL KRGTLDLSKL SGLVLDEADE MLRMGFIEDV ETIMAQIPEG
HQTALFSATM PEAIRRITRR FMKEPQEVRI QSSVTTRPDI SQSYWTVWGM RKNEALVRFL
EAEDFDAAII FVRTKNATLE VAEALERNGY NSAALNGDMN QALREQTLER LKDGRLDILI
ATDVAARGLD VERISLVVNY DIPMDSESYV HRIGRTGRAG RAGRALLFVE NRERRLLRNI
ERTMKLTIPE VELPNAELLG KRRLEKFAAK VQQQLESSDL DQYRALLSKI QPTAEGEELD
LETLAAALLK MAQGERTLIV PPDAPMRPKR EFRDRDDRGP RDRNDRGPRG DREDRPRRER
RDVGDMQLYR IEVGRDDGVE VRHIVGAIAN EGDISSRYIG NIKLFASHST IELPKGMPGE
VLQHFTRTRI LNKPMNMQLL GDAQPHTGGE RRGGGRGFSG ERREGGRNFS GERREGGRGD
GRRFSGERRE GRAPRRDDST GRRRFGGDA
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