| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4450 |
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| Symbol | agaF |
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| ID | 6971609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4124684 |
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| End bp | 4125118 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643388170 |
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| Product | PTS system, mannose/sorbose-specific, IIA component |
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| Protein accession | YP_002272607 |
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| Protein GI | 209399806 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA |
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| TIGRFAM ID | [TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.236223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAGTA TTATTTTGAC AGGGCATGGC GGGTTTGCCA GCGGCATGGA AAAAGCAATG
AAGCAAATTC TCGGTGAGCA ATCGCAGTTT ATCGCCATCG ATTTTCCGGA AACCTCAAGC
ACCGCGCTGC TTACATCGCA GCTTGAAGAG GCCATCGCCC AACTGGATTG TGAAGACGGC
ATTGTTTTTC TGACGGATTT GCTGGGCGGC ACGCCGTTTC GCGTAGCTTC AACGCTGGCG
ATGCAAAAAC CGGGCTGTGA AGTGATCACC AGCACCAATT TGCAACTGCT ACTGGAGATG
GTGCTGGAGC GCGAAGGGTT AAGCGGTGAA GAATTCCGTG TACAGGCGCT GGAGTGTGGA
CATCGTGGGC TGACCAGTCT GGTGGACGAG TTAGGCCGCT GCCATGAAGA ATGTCCGGTC
GAGGAAGGGA TATGA
|
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| Protein sequence | MLSIILTGHG GFASGMEKAM KQILGEQSQF IAIDFPETSS TALLTSQLEE AIAQLDCEDG
IVFLTDLLGG TPFRVASTLA MQKPGCEVIT STNLQLLLEM VLEREGLSGE EFRVQALECG
HRGLTSLVDE LGRCHEECPV EEGI
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