Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4448 |
Symbol | agaW |
ID | 6971176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4123019 |
End bp | 4123798 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643388168 |
Product | PTS system, N-acetylgalactosamine-specific, IIC component |
Protein accession | YP_002272605 |
Protein GI | 209399451 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.601715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATCA GTCTGTTGCA GGCATTCGCG TTGGGCATTA TCGCCTTTAT CGCTGGCCTG GATATGTTTA ACGGCTTAAC CCATATGCAC CGCCCAGTGG TCCTCGGCCC GTTAGTCGGG CTGGTACTTG GCGATCTGCA TACCGGTATT TTAACCGGCG GTACGCTGGA ACTGGTGTGG ATGGGGCTGG CCCCGCTGGC GGGCGCACAG CCGCCTAATG TGATTATCGG TACTATCGTC GGCACGGCGT TTGCCATTAC TACTGGCGTG AAACCCGATG TCGCAGTCGG TGTCGCCGTA CCTTTCGCTG TCGCAGTACA GATGGGGATT ACCTTCCTGT TCTCGGTGAT GTCTGGCGTG ATGTCTCGCT GCGACCGGAT GGCGGAGAAC GCCGATACTC GCGGCATTGA ACGCGTAAAC TATCTGGCAC TGCTGGCACT CGGCACTTTC TATTTTCTCT GCGCTTTCCT GCCTATCTAC TTCGGCGCGG AACATGCAAA AACCATCATT GATGTCCTGC CGCAACGATT AATCGACGGC CTCGGCGTCG CGGGCGGCAT CATGCCAGCA ATCGGTTTTG CCGTGCTGCT GAAAATCATG ATGAAAAACG TCTACATCCC CTACTTCATC CTGGGCTTTG TTGCCGCAGC CTGGCTCAAG TTACCGGTGC TGGCTATTGC TGCCGCCGCG CTGGCGATGG CGCTGATCGA TCTGCTGCGT AAATCTCCTG AACCGACTCA ACCTGCGGCA CAGAAAGAGG AATTTGAAGA TGGCATCTAA
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Protein sequence | MEISLLQAFA LGIIAFIAGL DMFNGLTHMH RPVVLGPLVG LVLGDLHTGI LTGGTLELVW MGLAPLAGAQ PPNVIIGTIV GTAFAITTGV KPDVAVGVAV PFAVAVQMGI TFLFSVMSGV MSRCDRMAEN ADTRGIERVN YLALLALGTF YFLCAFLPIY FGAEHAKTII DVLPQRLIDG LGVAGGIMPA IGFAVLLKIM MKNVYIPYFI LGFVAAAWLK LPVLAIAAAA LAMALIDLLR KSPEPTQPAA QKEEFEDGI
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