| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4438 |
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| Symbol | garL |
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| ID | 6970329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4115105 |
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| End bp | 4115875 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643388158 |
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| Product | alpha-dehydro-beta-deoxy-D-glucarate aldolase |
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| Protein accession | YP_002272595 |
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| Protein GI | 209397366 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| TIGRFAM ID | [TIGR03239] 2-dehydro-3-deoxyglucarate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.867031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.323849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAACG ATGTTTTCCC GAATAAATTC AAAGCCGCAC TGGCTGCGAA ACAGGTACAA
ATTGGTTGCT GGTCAGCACT CTCTAACCCG ATTAGCACTG AAGTTCTTGG TTTGGCTGGG
TTTGACTGGC TGGTGCTGGA TGGCGAACAT GCGCCAAACG ATATTTCAAC GTTTATTCCG
CAGTTAATGG CCCTGAAAGG CAGCGCCAGC GCGCCAGTAG TGCGAGTGCC GACCAACGAG
CCGGTAATTA TTAAGCGTCT TCTGGATATC GGTTTCTATA ACTTCCTGAT TCCTTTTGTA
GAAACAAAAG AGGAAGCAGA GCAGGCGGTG GCATCGACGC GTTATCCGCC AGAAGGCATT
CGCGGCGTCT CCGTTTCTCA CCGCGCCAAT ATGTTTGGCA CCGTGGCGGA TTATTTCGCT
CAGTCGAACA AGAACATCAC TATTCTGGTC CAGATAGAAA GTCAGCAGGG CGTAGATAAC
GTCGATGCTA TTGCCGCTAC CGAAGGCGTA GACGGCATCT TCGTCGGCCC CAGCGATCTG
GCCGCGGCAT TAGGCCATCT CGGCAATGCA TCACACCCGG ATGTACAAAA AACAATTCAG
CACATTTTTA ACCGTGCCAG CGCGCACGGC AAACCCAGCG GTATCCTCGC GCCGGTCGAA
GCCGATGCGC GTCGTTATCT GGAATGGGGC GCGACGTTTG TGGCTGTCGG CAGCGATCTC
GGCGTCTTCC GCTCTGCCAC TCAGAAACTG GCTGATACCT TTAAAAAATA A
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| Protein sequence | MNNDVFPNKF KAALAAKQVQ IGCWSALSNP ISTEVLGLAG FDWLVLDGEH APNDISTFIP
QLMALKGSAS APVVRVPTNE PVIIKRLLDI GFYNFLIPFV ETKEEAEQAV ASTRYPPEGI
RGVSVSHRAN MFGTVADYFA QSNKNITILV QIESQQGVDN VDAIAATEGV DGIFVGPSDL
AAALGHLGNA SHPDVQKTIQ HIFNRASAHG KPSGILAPVE ADARRYLEWG ATFVAVGSDL
GVFRSATQKL ADTFKK
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