Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4213 |
Symbol | scpA |
ID | 6970508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 3902723 |
End bp | 3904867 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643387953 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_002272392 |
Protein GI | 209400202 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAACG AGCAGGAGTG GCAACAGCTT GCCAACAAGG AATTGAGCCG TCGGGAGAAA ACTGTCGACT CGCTGGTTCA GCAAACCGCG GAAGGGATCG CCATCAAGCC GCTGTATACC GAAGCCGATC TCGATAATCT GGAGGTGACA GGTACCCTTC CTGGTTTGCC GCCCTACGTT CGTGGCCCGC GTGCCACTAT GTATACCGCC CAACCGTGGA CCATCCGTCA GTATGCTGGT TTTTCAACAG CAAAAGAGTC CAACGCTTTT TATCGCCGTA ACCTGGCCGC CGGGCAAAAA GGTCTTTCCG TTGCGTTTGA CCTTGCCACC CACCGTGGCT ACGACTCCGA TAACCCACGC GTGGCGGGTG ACGTCGGCAA AACGGGCGTC GCTATCGACA CCGTGGAAGA TATGAAAGTC CTGTTCGACC AGATCCCGCT GGATAAAATG TCGGTTTCGA TGACCATGAA TGGCGCAGTG CTACCAGTAC TGGCGTTTTA TATCATCGCC GCGGAAGAGC AAGGTGTTAC ACCTGATAAA CTGACCGGCA CCATTCAAAA CGATATTCTC AAAGAGTACC TCTGCCGCAA CACCTATATT TACCCGCCAA AACCGTCAAT GCGCATTATC GCCGACATCA TCGCCTGGTG TTCCGGCAAC ATGCCGCGAT TTAATACCAT CAGTATCAGC GGTTACCACA TGGGTGAAGC GGGTGCCAAC TGCGTGCAGC AGGTAGCATT TACGCTCGCT GATGGGATTG AGTACATCAA AGCAGCAATC TCTGCCGGAC TGAAAATTGA TGACTTCGCT CCTCGCCTGT CGTTCTTCTT CGGCATCGGC ATGGATCTGT TTATGAACGT CGCCATGTTG CGTGCGGCAC GTTATTTATG GAGCGAAGCG GTCAGTGGAT TTGGCGCACA GGACCCGAAA TCACTGGCGC TGCGTACCCA CTGCCAGACC TCAGGCTGGA GCCTGACTGA ACAGGATCCG TATAACAACG TTATCCGCAC CACCATTGAA GCGCTGGCTG CGACGCTGGG CGGTACTCAG TCACTGCATA CCAACGCCTT TGACGAAGCG CTTGGTTTGC CTACCGATTT CTCAGCACGC ATTGCCCGCA ACACCCAGAT CATCATCCAG GAAGAATCAG AACTCTGCCG CACCGTCGAT CCACTGGCCG GATCCTATTA CATTGAGTCG CTGACCGATC AAATCGTCAA ACAAGCCAGA GCTATTATCC AACAGATCGA CGAAGCCGGT GGCATGGCGA AAGCGATCGA AGCAGGTCTG CCAAAACGAA TGATCGAAGA GGCCTCAGCG CGCGAACAGT CGCTGATCGA CCAGGGCAAG CGTGTCATCG TTGGTGTCAA CAAGTACAAA CTGGATCACG AAGACGAAAC CGATGTACTT GAGATCGACA ACGTGATGGT GCGTAACGAG CAAATTGCTT CGCTGGAACG CATTCGCGCC ACCCGTGATG ATGCCGCCGT AACCGCCGCG TTGAACGCCC TGACTCACGC CGCACAGCAT AACGAAAACC TGCTGGCTGC CGCTGTTAAT GCCGCTCGCG TTCGCGCCAC CCTGGGTGAA ATTTCCGATG CGCTGGAAGC CGCTTTCGAC CGTTATCTGG TGCCAAGCCA GTGTGTTACC GGCGTGATTG CGCAAAGCTA TCATCAATCT GAGAAATCGG CCTCCGAGTT CGATGCCATT GTTGCGCAAA CGGAGCAGTT CCTTGCCGAC AATGGTCGTC GCCCGCGCAT TCTGATCGCC AAAATGGGCC TGGATGGACA CGATCGCGGC GCGAAAGTGA TCGCCAGCGC CTATTCCGAT CTCGGTTTCG ACGTAGATTT AAGCCCGATG TTCTCTACAC CTGAAGAGAT CGCCCGCCTG GCAGTAGAAA ATGACGTTCA CGTAGTGGGC GCATCCTCAC TGGCTGCCGG TCATAAAACG CTGATCCCGG AACTGGTCGA AGCGCTGAAA AAATGGGGAC GCGAAGATAT CTGCGTAGTC GCCGGTGGCG TCATTCCACC GCAGGATTAC GCCTTCCTGC AAGAGCGCGG CGTGGCGGCG ATTTATGGTC CAGGTACACC TATGCTCGAC AGTGTGCGCG ACGTACTGAA TCTGATAAGC CAGCATCATG ATTAA
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Protein sequence | MSNEQEWQQL ANKELSRREK TVDSLVQQTA EGIAIKPLYT EADLDNLEVT GTLPGLPPYV RGPRATMYTA QPWTIRQYAG FSTAKESNAF YRRNLAAGQK GLSVAFDLAT HRGYDSDNPR VAGDVGKTGV AIDTVEDMKV LFDQIPLDKM SVSMTMNGAV LPVLAFYIIA AEEQGVTPDK LTGTIQNDIL KEYLCRNTYI YPPKPSMRII ADIIAWCSGN MPRFNTISIS GYHMGEAGAN CVQQVAFTLA DGIEYIKAAI SAGLKIDDFA PRLSFFFGIG MDLFMNVAML RAARYLWSEA VSGFGAQDPK SLALRTHCQT SGWSLTEQDP YNNVIRTTIE ALAATLGGTQ SLHTNAFDEA LGLPTDFSAR IARNTQIIIQ EESELCRTVD PLAGSYYIES LTDQIVKQAR AIIQQIDEAG GMAKAIEAGL PKRMIEEASA REQSLIDQGK RVIVGVNKYK LDHEDETDVL EIDNVMVRNE QIASLERIRA TRDDAAVTAA LNALTHAAQH NENLLAAAVN AARVRATLGE ISDALEAAFD RYLVPSQCVT GVIAQSYHQS EKSASEFDAI VAQTEQFLAD NGRRPRILIA KMGLDGHDRG AKVIASAYSD LGFDVDLSPM FSTPEEIARL AVENDVHVVG ASSLAAGHKT LIPELVEALK KWGREDICVV AGGVIPPQDY AFLQERGVAA IYGPGTPMLD SVRDVLNLIS QHHD
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