| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4176 |
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| Symbol | |
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| ID | 6966902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3871559 |
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| End bp | 3873484 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643387921 |
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| Product | putative oxidoreductase Fe-S binding subunit |
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| Protein accession | YP_002272360 |
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| Protein GI | 209398308 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1142] Fe-S-cluster-containing hydrogenase components 2 |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.623364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 87 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATGA ATAAGTTTAT CGCTGCTGAA GCCGCGGAAT GTATAGGCTG TCATGCTTGT
GAAATTGCCT GTGCGGTGGC ACACAATCAA GAAAACTGGC CGCTGAGTCA CAGTGACTTT
CGACCACGTA TCCACGTTGT AGGGAAAGGC CTGGCTGCGA ATCCGGTGGC CTGCCATCAC
TGCAACAATG CCCCTTGCGT TACGGCTTGT CCGGTTAATG CTCTGACTTT CCAGTCCGAT
AGCGTACAAC TGGACGAGCA AAAATGTATT GGTTGTAAAA GATGCGCAAT CGCTTGCCCC
TTTGGCGTCG TTGAGATGGT CGATACGATT GCGCAGAAAT GCGACCTTTG TAACCAGCGC
AGTTCCGGCA CGCAAGCCTG TATTGAAGTT TGCCCAACAC AGGCGTTACG ACTGATGGAC
GATAAAGGGT TACAGCAGAT AAAGGTGGCC CGCCAGCGCA AAACGGCAGC AGGAAAAGCG
TCATCAGACG CTCAGCCATC TCGCAGTGCA GCGTTGCTCC CCGTTAACTC GCGTAAAGGC
GCAGATAAAA TTTCAGCAAG TGAACGGAAA AACCACTTTG GCGAAATCTA TTGCGGGCTG
GATCCACAAC AAGCGACTTA TGAGAGTGAC CGCTGTGTTT ATTGTGCCGA AAAAGCTAAC
TGCAACTGGC ATTGCCCGCT GCATAACGCT ATTCCGGATT ACATCCGTCT GGTACAGGAG
GGAAAGATTA TTGAAGCGGC AGAACTTTGC CACCAGACCA GTTCCTTACC AGAAATCTGC
GGCAGGGTAT GTCCACAGGA CCGTCTTTGT GAAGGCGCAT GTACTTTGAA AGATCACTCT
GGCGCAGTCT CTATCGGTAA TCTGGAACGC TACATCACCG ATACCGCGCT GGCGATGGGC
TGGCGTCCCG ATGTCAGCAA AGTTGTTCCC CGTATCGAGA AAGTGGCGGT GATTGGCGCT
GGGCCTGCAG GGTTAGGGTG TGCTGATATT CTGGCGCGCG CAGGAGTTCA GGTCGATGTC
TTTGATCGCC ATCCAGAAAT TGGCGGTATG CTGACTTTTG GCATTCCTCC TTTCAAACTC
GATAAAACGG TATTAAGCCA GCGGCGAGAG ATATTCACCG CAATGGGAAT CGACTTTCAT
CTTAACTGTG AAATTGGCCG CGATATTACC TTTAGCGATT TAACTTCTGA ATATGATGCA
GTTTTCATCG GCGTGGGGAC TTACGGGATG ATGCGAGCAG ATCTGCCGCA TGAAGATGCG
CCCGGTGTCA TTCAGGCTCT ACCGTTCCTG ACTGCCCATA CCCGCCAGCT CATGGGATTG
CCGGAGTCTG AAGAGTATCC GCTGACGGAC GTGGAAGGTA AGCGAGTCGT GGTATTGGGC
GGTGGCGATA CGACAATGGA TTGTTTGCGG ACTTCCATTC GCCTCAATGC TGCCAGCGTG
ACCTGCGCGT ATCGTCGTGA TGAAGTCAGT ATGCCGGGCT CGCGCAAAGA GGTGGTCAAT
GCGCGCGAGG AAGGTGTCGA GTTTCAATTC AATGTTCAGC CGCAATATAT CGCTTGTGAC
GAAGATGGGC GTTTAACTGC GGTGGGCCTG ATTCGTACCG CCATGGGTGA GCCGGGGCCG
GATGGTCGCC GTCGTCCTCG TCCGGTTGCG GGTTCAGAGT TTGAATTGCC CGCCGATGTT
CTCATTATGG CCTTTGGTTT CCAGGCGCAT GCCATGCCGT GGTTGCAGGG CAGCGGAATT
AAACTCGATA AATGGGGCCT GATTCAAACC GGTGACGTCG GGTATTTACC TACCCAGACG
CATCTGAAAA AAGTCTTTGC TGGTGGTGAT GCAGTTCATG GCGCGGATCT GGTTGTCACT
GCAATGGCCG CAGGAAGGCA GGCGGCGCGC GATATGTTAA CTCTGTTTGA TACGAAGGCA
TCGTGA
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| Protein sequence | MQMNKFIAAE AAECIGCHAC EIACAVAHNQ ENWPLSHSDF RPRIHVVGKG LAANPVACHH
CNNAPCVTAC PVNALTFQSD SVQLDEQKCI GCKRCAIACP FGVVEMVDTI AQKCDLCNQR
SSGTQACIEV CPTQALRLMD DKGLQQIKVA RQRKTAAGKA SSDAQPSRSA ALLPVNSRKG
ADKISASERK NHFGEIYCGL DPQQATYESD RCVYCAEKAN CNWHCPLHNA IPDYIRLVQE
GKIIEAAELC HQTSSLPEIC GRVCPQDRLC EGACTLKDHS GAVSIGNLER YITDTALAMG
WRPDVSKVVP RIEKVAVIGA GPAGLGCADI LARAGVQVDV FDRHPEIGGM LTFGIPPFKL
DKTVLSQRRE IFTAMGIDFH LNCEIGRDIT FSDLTSEYDA VFIGVGTYGM MRADLPHEDA
PGVIQALPFL TAHTRQLMGL PESEEYPLTD VEGKRVVVLG GGDTTMDCLR TSIRLNAASV
TCAYRRDEVS MPGSRKEVVN AREEGVEFQF NVQPQYIACD EDGRLTAVGL IRTAMGEPGP
DGRRRPRPVA GSEFELPADV LIMAFGFQAH AMPWLQGSGI KLDKWGLIQT GDVGYLPTQT
HLKKVFAGGD AVHGADLVVT AMAAGRQAAR DMLTLFDTKA S
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