Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4102 |
Symbol | lplT |
ID | 6968771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3799466 |
End bp | 3800659 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643387859 |
Product | lysophospholipid transporter LplT |
Protein accession | YP_002272299 |
Protein GI | 209396999 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0120469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.000572662 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGAGT CAGTGCACAC TAACACTTCG TTGTGGTCGA AGGGGATGAA AGCGGTTATC GTGGCGCAGT TTCTCTCTGC GTTTGGCGAT AATGCCCTAC TGTTTGCCAC TCTGGCGTTA CTGAAAGCGC AGTTCTATCC GGAGTGGAGC CAGCCCATCC TGCAAATGGT GTTTGTAGGT GCTTACATTC TTTTTGCGCC GTTTGTCGGG CAGGTGGCGG ATAGCTTCGC CAAAGGCCGG GTGATGATGT TTGCCAACGG CCTGAAGCTG CTGGGCGCAG CCAGTATCTG CTTTGGTATC AATCCGTTTC TCGGCTATAC GCTGGTGGGT GTTGGTGCTG CAGCCTATTC ACCGGCGAAA TACGGTATTC TCGGCGAATT AACCACGGGT AGTAAGTTAG TAAAAGCTAA CGGTTTAATG GAAGCTTCTA CCATAGCGGC GATTTTGCTC GGTTCCGTAG CCGGTGGTGT GCTGGCTGAC TGGCATGTCC TGGTCGCCCT GGCCGCATGC GCACTGGCCT ACGGTGGTGC GGTCGTTGCC AATATCTACA TTCCCAAACT GGCGGCGGCG CGTCCGGGGC AGTCCTGGAA TCTCATCAAC ATGACCCGCA GTTTCCTGAA TGCCTGCACC TCGCTATGGC GCAATGGTGA AACGCGTTTT TCGCTGGTGG GCACCAGTTT ATTCTGGGGA GCGGGTGTCA CGCTGCGTTT CCTGTTGGTG CTGTGGGTAC CGGTGGCGCT GGGCATTACC GATAACGCTA CGCCGACCTA TCTCAACGCG ATGGTAGCGA TTGGTATCGT GGTTGGCGCA GGTGCGGCAG CGAAGCTGGT TACGCTGGAA ACCGTGTCAC GCTGTATGCC AGCCGGAATT TTGATTGGCG TGGTGGTACT GATTTTCTCC CTGCAACACG AGCAGCTGCC AGCCTATGCC TTGTTGATGC TGATTGGCGT GTTGGGGGGC TTTTTTGTCG TTCCGCTCAA TGCGTTGCTA CAGGAGCGGG GTAAAAAAAG CGTCGGGGCG GGGAATGCGA TTGCAGTACA AAACCTTGGC GAAAACAGCG CCATGTTGTT GATGCTGGGC ATTTACTCGC TGGCGGTAAT GGTAGGCATC CCGGTCGTGC CCATTGGCAT TGGCTTCGGT GCGCTATTTG CGCTGGCAAT AACGGCGCTG TGGATCTGGC AGCGCCGTCA TTAA
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Protein sequence | MSESVHTNTS LWSKGMKAVI VAQFLSAFGD NALLFATLAL LKAQFYPEWS QPILQMVFVG AYILFAPFVG QVADSFAKGR VMMFANGLKL LGAASICFGI NPFLGYTLVG VGAAAYSPAK YGILGELTTG SKLVKANGLM EASTIAAILL GSVAGGVLAD WHVLVALAAC ALAYGGAVVA NIYIPKLAAA RPGQSWNLIN MTRSFLNACT SLWRNGETRF SLVGTSLFWG AGVTLRFLLV LWVPVALGIT DNATPTYLNA MVAIGIVVGA GAAAKLVTLE TVSRCMPAGI LIGVVVLIFS LQHEQLPAYA LLMLIGVLGG FFVVPLNALL QERGKKSVGA GNAIAVQNLG ENSAMLLMLG IYSLAVMVGI PVVPIGIGFG ALFALAITAL WIWQRRH
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