| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4091 |
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| Symbol | ppdA |
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| ID | 6968807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3790504 |
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| End bp | 3790974 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643387849 |
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| Product | hypothetical protein |
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| Protein accession | YP_002272289 |
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| Protein GI | 209399023 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0320835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.410981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC AACGTGGTTA TACGCTGATT GAAACGCTGG TCGCGATGCT GATTTTGGTC
ATGCTAAGCG CAAGTGGACT CTATGGCTGG CAATACTGGC AGCAGTCGCA ACGGCTTTGG
CAAACCGCCA GCCAGGCGCG GGACTATTTG CTCTATTTAC GTGAAGATGC CAACTGGCAT
AACCGCGACC ACAGTATCAG TTTTATCAGG GAGGGGACGT TATGGTGCCT TGTGAGTTCC
GTTGCTGGGG CGAATACCTG TCATGGCAGT TCACCATTGG TCTTTGTGCC ACGCTGGCCC
GAAGTCGAAA TGAGCGACCT GACACCTTCG CTTGCTTTCT TTGGCCTGCG CAATACCGCA
TGGGCCGGGC ATATTGGCTT CAAAAACTCA ACGGGCGAGT GGTGGCTGGT GGTTTCGCCG
TGGGGAAGAC TCCGGCTTTG TCAGCAAGGA GAAACAGAAG GATGCCTGTA A
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| Protein sequence | MKTQRGYTLI ETLVAMLILV MLSASGLYGW QYWQQSQRLW QTASQARDYL LYLREDANWH
NRDHSISFIR EGTLWCLVSS VAGANTCHGS SPLVFVPRWP EVEMSDLTPS LAFFGLRNTA
WAGHIGFKNS TGEWWLVVSP WGRLRLCQQG ETEGCL
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