| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3983 |
|---|
| Symbol | fhlA |
|---|
| ID | 6967917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 3682467 |
|---|
| End bp | 3684545 |
|---|
| Gene Length | 2079 bp |
|---|
| Protein Length | 692 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643387752 |
|---|
| Product | formate hydrogenlyase transcriptional activator |
|---|
| Protein accession | YP_002272195 |
|---|
| Protein GI | 209396082 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.933844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATATA CACCGATGAG TGATCTCGGA CAGCAAGGGT TGTTCGACAT CACTCGGACA
CTATTGCAGC AGCCCGATCT GGCCTCGCTG TGTGAGGCTC TTTCGCAACT GGTAAAGCGT
TCTGCGCTCG CCGACAACGC GGCTATTGTG TTGTGGCAAG CGCAGACTCA ACGTGCGTCT
TATTACGCAT CGCGTGAAAA AGACACCCCC ATTAAATATG AAGACGAAAC TGTTCTGGCA
CACGGTCCGG TACGCAGCAT TTTGTCGCGC CCTGATACGT TGCATTGCAG TTACGAAGAA
TTTTGTGAAA CCTGGCCGCA GCTGGCCGCA GGTGGGCTAT ACCCAAAATT TGGTCACTAT
TGCCTGATGC CACTGGCGGC GGAAGGGCAT ATTTTTGGTG GCTGTGAATT TATTCGTTAT
GACGATCGCC CCTGGAGCGA AAAAGAGTTC AATCGTCTGC AAACATTTAC GCAGATCGTT
TCTGTCGTCA CCGAACAAAT CCAGAGTCGC GTCGTTAACA ATGTCGACTA TGAGTTGTTA
TGCCGGGAAC GCGATAACTT CCGCATCCTG GTCGCCATCA CCAACGCGGT GCTTTCCCGC
CTGGATATGG ACGAACTGGT CAGCGAAGTC GCCAAAGAAA TCCATTACTA TTTCGATATT
GACGATATCA GTATCGTCTT ACGCAGCCAC CGTAAAAACA AACTCAACAT CTACTCCACT
CACTATCTTG ATAAACAGCA TCCCGCCCAC GAACAGAGCG AAGTCGATGA AGCCGGAACC
CTCACCGAAC GCGTGTTCAA AAGTAAAGAG ATGCTGCTGA TTAATCTCCA CGAGCGGGAT
GATTTAGCCC CCTATGAACG CATGTTGTTC GATACCTGGG GCAACCAGAT TCAAACCTTG
TGCCTGTTAC CGCTGATGTC TGGCGACACC ATGCTGGGCG TGCTGAAACT GGCGCAATGT
GAAGAGAAAG TGTTTACCAC TACCAATCTG AATTTACTGC GCCAGATTGC CGAACGTGTG
GCAATCGCTG TCGATAACGC CCTCGCCTAT CAGGAAATCC ATCGTCTGAA AGAACGGCTG
GTTGATGAAA ACCTCGCCCT GACCGAGCAG CTCAACAATG TTGATAGTGA ATTTGGCGAG
ATTATTGGCC GCAGCGAAGC CATGTACAGC GTGCTTAAAC AAGTTGAAAT GGTGGCGCAA
AGTGACAGTA CCGTGCTGAT CCTCGGTGAA ACTGGCACGG GTAAAGAGCT GATTGCCCGT
GCTATCCATA ATCTCAGTGG GCGTAATAAT CGCCGCATGG TCAAAATGAA CTGCGCGGCG
ATGCCTGCCG GATTGCTGGA GAGCGATCTG TTTGGTCATG AGCGTGGGGC TTTTACCGGT
GCCAGCGCCC AGCGTATCGG TCGTTTTGAA CTGGCGGATA AAAGCTCCCT GTTCCTCGAC
GAAGTGGGCG ATATGCCACT GGAGTTACAG CCGAAGTTGC TGCGTGTATT GCAGGAACAG
GAGTTTGAAC GCCTCGGCAG CAACAAAATC ATTCAGACGG ACGTGCGTCT AATCGCCGCG
ACTAACCGCG ATCTGAAAAA AATGGTCGCC GACCGTGAGT TCCGTAGCGA TCTCTATTAC
CGCCTGAACG TATTCCCGAT TCACCTGCCG CCACTACGCG AGCGTCCGGA AGATATTCCG
CTGCTGGCGA AAGCCTTTAC CTTCAAAATT GCCCGTCGTC TGGGGCGCAA TATCGACAGC
ATTCCTGCCG AGACGTTGCG CACCTTGAGC AATATGGAGT GGCCGGGTAA CGTACGCGAA
CTGGAAAACG TCATTGAGCG CGCGGTATTG CTAACACGCG GCAACGTGCT GCAGCTGTCA
TTGCCAGATA TTGCTTTACC GGAGCCTGAA ACGCCGCCTG CCGCAACGGT TGTCGCTCAG
GAGGGCGAAG ATGAATATCA GTTGATTGTT CGCGTGCTGA AAGAAACTAA CGGCGTGGTT
GCCGGGCCTA AAGGCGCTGC GCAACGTCTG GGGCTGAAAC GCACGACCCT GCTGTCACGG
ATGAAGCGAC TGGGAATTGA TAAATCGGCA TTGATTTAA
|
|---|
| Protein sequence | MSYTPMSDLG QQGLFDITRT LLQQPDLASL CEALSQLVKR SALADNAAIV LWQAQTQRAS
YYASREKDTP IKYEDETVLA HGPVRSILSR PDTLHCSYEE FCETWPQLAA GGLYPKFGHY
CLMPLAAEGH IFGGCEFIRY DDRPWSEKEF NRLQTFTQIV SVVTEQIQSR VVNNVDYELL
CRERDNFRIL VAITNAVLSR LDMDELVSEV AKEIHYYFDI DDISIVLRSH RKNKLNIYST
HYLDKQHPAH EQSEVDEAGT LTERVFKSKE MLLINLHERD DLAPYERMLF DTWGNQIQTL
CLLPLMSGDT MLGVLKLAQC EEKVFTTTNL NLLRQIAERV AIAVDNALAY QEIHRLKERL
VDENLALTEQ LNNVDSEFGE IIGRSEAMYS VLKQVEMVAQ SDSTVLILGE TGTGKELIAR
AIHNLSGRNN RRMVKMNCAA MPAGLLESDL FGHERGAFTG ASAQRIGRFE LADKSSLFLD
EVGDMPLELQ PKLLRVLQEQ EFERLGSNKI IQTDVRLIAA TNRDLKKMVA DREFRSDLYY
RLNVFPIHLP PLRERPEDIP LLAKAFTFKI ARRLGRNIDS IPAETLRTLS NMEWPGNVRE
LENVIERAVL LTRGNVLQLS LPDIALPEPE TPPAATVVAQ EGEDEYQLIV RVLKETNGVV
AGPKGAAQRL GLKRTTLLSR MKRLGIDKSA LI
|
|---|
| |