Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3957 |
Symbol | srlR |
ID | 6970150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 3657211 |
End bp | 3657984 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643387726 |
Product | DNA-bindng transcriptional repressor SrlR |
Protein accession | YP_002272169 |
Protein GI | 209398484 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCTC GTCAGCGTCA AGCCGCCATT CTGGAGTATC TGCAAAAGCA GGGAAAATGC TCGGTTGAAG AATTGGCGCA ATATTTTGAC ACCACAGGCA CAACTATTCG CAAAGATCTG GTCATTCTGG AACATGCCGG AACCGTCATT CGTACTTATG GCGGAGTGGT GTTGAATAAA GAGGAATCCG ATCCGCCTAT CGATCATAAA ACACTCATCA ACACCCACAA GAAAGAGCTG ATAGCAGAAG CTGCCGTTGG TTTTATTCAT GATGGCGATT CGATCATTCT TGATGCTGGC AGTACCGTTT TGCAGATGGT GCCTCTGCTC TCGCGCTTTA ATAACATCAC GGTGATGACC AACAGCCTGC ATATCGTCAA TGCGTTATCT GAACTGGATA ATGAACAAAC TATCCTGATG CCAGGCGGAA CGTTTCGTAA AAAATCGGCC TCATTTCACG GGCAGCTGGC AGAGAATGCC TTCGAGCATT TCACCTTCGA CAAATTATTC ATGGGTACCG ACGGCATCGA TCTCAATGCG GGCGTAACCA CCTTCAACGA GGTCTATACC GTCAGTAAGG CAATGTGCAA TGCCGCGCGC GAAGTGATTT TGATGGCGGA CTCATCAAAG TTTGGCCGTA AAAGCCCCAA CGTAGTTTGC AGTCTTGAAA GCGTCGATAA GCTGATTACC GACGCAGATA TCGATCCGGC GTTTCGTCAG GCGCTGGAAG AGAAAGGGAT CGATGTGATC ATAACCGGAG AGAGCAATGA GTGA
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Protein sequence | MKPRQRQAAI LEYLQKQGKC SVEELAQYFD TTGTTIRKDL VILEHAGTVI RTYGGVVLNK EESDPPIDHK TLINTHKKEL IAEAAVGFIH DGDSIILDAG STVLQMVPLL SRFNNITVMT NSLHIVNALS ELDNEQTILM PGGTFRKKSA SFHGQLAENA FEHFTFDKLF MGTDGIDLNA GVTTFNEVYT VSKAMCNAAR EVILMADSSK FGRKSPNVVC SLESVDKLIT DADIDPAFRQ ALEEKGIDVI ITGESNE
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