| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3955 |
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| Symbol | srlD |
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| ID | 6971782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 3655900 |
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| End bp | 3656679 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643387724 |
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| Product | sorbitol-6-phosphate dehydrogenase |
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| Protein accession | YP_002272167 |
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| Protein GI | 209400828 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCAGG TTGCCGTTGT CATCGGTGGT GGGCAAACCT TAGGCGCGTT CCTGTGCCAC
GGTCTGGCTG CCGAGGGGTA TCGCGTCGCG GTTGTCGATA TTCAGAGCGA CAAAGCCGCA
AATGTGGCAC AAGAAATTAA CGCCGAATAT GGTGAAGGAA CAGCGTATGG TTTTGGTGCT
GACGCCACTA GCGAGCAAAG CGTTCTGGCG CTCTCTCGTG GGGTAGATGA AATCTTTGTT
CGTGTGGATT TACTGGTCTA CAGCGCCGGA ATTGCAAAAG CAGCCTTTAT CAGCGACTTC
CAGCTCGGCG ATTTTGACCG TTCGCTACAG GTGAATCTGG TGGGTTATTT CCTGTGTGCG
CGTGAATTTT CGCGTTTGAT GATCCGCGAT GGGATTCAGG GACGCATTAT TCAGATCAAC
TCGAAATCCG GCAAAGTGGG CAGCAAACAC AATTCTGGTT ATAGCGCCGC GAAATTTGGT
GGCGTAGGGC TGACTCAATC ACTGGCGCTG GATCTGGCGG AGTACGGCAT TACGGTGCAT
TCACTGATGC TCGGTAACCT GCTGAAATCG CCGATGTTCC AGTCGCTGTT GCCACAATAT
GCCACCAAGC TGGGTATCAA ACCGGATCAA GTCGAGCAGT ATTACATCGA CAAAGTACCG
CTCAAACGCG GCTGCGATTA TCAGGATGTG CTGAATATGC TGCTGTTCTA CGCCAGTCCT
AAGGCGTCGT ACTGTACCGG ACAGTCGATC AATGTCACCG GCGGTCAGGT GATGTTCTGA
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| Protein sequence | MNQVAVVIGG GQTLGAFLCH GLAAEGYRVA VVDIQSDKAA NVAQEINAEY GEGTAYGFGA
DATSEQSVLA LSRGVDEIFV RVDLLVYSAG IAKAAFISDF QLGDFDRSLQ VNLVGYFLCA
REFSRLMIRD GIQGRIIQIN SKSGKVGSKH NSGYSAAKFG GVGLTQSLAL DLAEYGITVH
SLMLGNLLKS PMFQSLLPQY ATKLGIKPDQ VEQYYIDKVP LKRGCDYQDV LNMLLFYASP
KASYCTGQSI NVTGGQVMF
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