Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3907 |
Symbol | |
ID | 6970561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3622760 |
End bp | 3623209 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643387681 |
Product | LysM domain/BON superfamily protein |
Protein accession | YP_002272129 |
Protein GI | 209398904 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.979345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.391605 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCTGT TCAATTTTGT GAAAGATGCC GGAGAAAAAC TCTGGGACGC GGTTACAGGT CAGCACGATA AAGATGATCA GGCGAAGAAG GTGCAGGAGC ATCTGAGCAA AACCGGTATA CCTGATGCCG ATAAAGTGAA CATTCAAATT GCCGATGGCA AAGCGACGGT CACTGGTGAC GGCCTGAGTC AGGAGGCGAA GGAGAAAATC CTTGTTGCGG TGGGGAATAT TTCCGGTATT GCCAGTGTTG ATGATCAGGT GAAAACGGCG ACACCAGCCA CTGCCAGCCA GTTTTATACC GTTAAGTCTG GCGACACTCT GAGTGCCATT TCCAAACAGG TCTACGGTAA CGCTAATCTG TACAATAAAA TCTTCGAAGC GAATAAACCG ATGCTAAAAA GCCCGGATAA AATTTATCCG GGGCAAGTGT TGCGTATTCC GGAAGAGTAG
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Protein sequence | MGLFNFVKDA GEKLWDAVTG QHDKDDQAKK VQEHLSKTGI PDADKVNIQI ADGKATVTGD GLSQEAKEKI LVAVGNISGI ASVDDQVKTA TPATASQFYT VKSGDTLSAI SKQVYGNANL YNKIFEANKP MLKSPDKIYP GQVLRIPEE
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