Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3904 |
Symbol | gabT2 |
ID | 6970839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 3619158 |
End bp | 3620438 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643387678 |
Product | 4-aminobutyrate aminotransferase |
Protein accession | YP_002272126 |
Protein GI | 209398707 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.888156 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCA ATAAAGAGTT AATGCAGCGC CGCAGTCAGG CAATTCCTCG TGGCGTTGGG CAAATTCACC CCATTTTCGC TGATCGCGCG GAAAACTGCC GGGTGTGGGA CGTTGAAGGC CGTGAGTATC TTGATTTCGC GGGCGGCATT GCGGTGCTCA ATACCGGGCA CCTGCATCCG AAAGTGGTTG CCGCGGTGGA AGCGCAGTTG AAAAAACTGT CGCACACCTG CTTCCAGGTG CTGGCTTACG AGCCGTATCT GGAGCTGTGC GAGATTATGA ATCAGAAGGT GCCGGGCGAT TTTGCCAAGA AAACGCTGCT GGTTACGACC GGTTCCGAAG CGGTGGAAAA CGCGGTGAAA ATCGCCCGCG CTGCCACCAA ACGTAGCGGC ACCATCGCTT TTAGCGGCGC GTATCACGGG CGCACGCATT ACACGCTGGC GCTGACCGGC AAGGTGAATC CGTACTCTGC GGGCATGGGC CTGATGCCAG GGCACGTTTA TCGCGCGCTT TATCCTTGCC CACTGCACGG CATCAGTGAA GATGATGCTA TCGCCAGTAT CCACCGAATT TTTAAAAATG ATGCTGCGCC GGAAGATATC GCCGCCATCG TGATTGAGCC GGTTCAGGGC GAAGGCGGTT TCTACGCCGC GACGCCTGCG TTTATGCAGC GTTTACGCGC GCTGTGTGAC GAGCACGGGA TCATGCTGAT TGCCGATGAA GTGCAGAGCG GCGCGGGGCG TACCGGCACG CTGTTTGCGA TGGAGCAAAT GGGCGTGGCA CCAGATCTCA CCACCTTTGC GAAATCGATC GCAGGCGGCT TCCCACTGGC GGGCGTCACC GGGCGCGCCG AAGTGATGGA TGCCGTCGCT CCAGGCGGGC TGGGTGGCAC CTATGCCGGT AATCCGATTG CCTGCGTGGC GGCGCTGGAA GTGTTGAAGG TGTTCGAGCA GGAAAATCTG CTGCAGAAAG CCAACGATCT GGGGCAGAAG TTGAAAGATG GATTGTTGGC GATCGCCGAA AAACACCCTG AGATCGGCGA CGTACGCGGG CTGGGGGCGA TGATCGCCAT CGAGCTGTTT GAAGACGGCG ATCACAACAA GCCGGACGCC AAACTCACCG CCGAGATCGT GGCTCGCGCC CGCGATAAAG GCCTGATTCT TCTCTCCTGC GGCCCGTATT ACAACGTGCT GCGCATCCTT GTACCGCTCA CCATTGAAGA CGCTCAGATC CGTCAGGGTC TGGAGATCAT CAGCCAGTGT TTTGCTGAGG CAAAGCAGTA G
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Protein sequence | MSSNKELMQR RSQAIPRGVG QIHPIFADRA ENCRVWDVEG REYLDFAGGI AVLNTGHLHP KVVAAVEAQL KKLSHTCFQV LAYEPYLELC EIMNQKVPGD FAKKTLLVTT GSEAVENAVK IARAATKRSG TIAFSGAYHG RTHYTLALTG KVNPYSAGMG LMPGHVYRAL YPCPLHGISE DDAIASIHRI FKNDAAPEDI AAIVIEPVQG EGGFYAATPA FMQRLRALCD EHGIMLIADE VQSGAGRTGT LFAMEQMGVA PDLTTFAKSI AGGFPLAGVT GRAEVMDAVA PGGLGGTYAG NPIACVAALE VLKVFEQENL LQKANDLGQK LKDGLLAIAE KHPEIGDVRG LGAMIAIELF EDGDHNKPDA KLTAEIVARA RDKGLILLSC GPYYNVLRIL VPLTIEDAQI RQGLEIISQC FAEAKQ
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