| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3812 |
|---|
| Symbol | nadB |
|---|
| ID | 6972035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 3534940 |
|---|
| End bp | 3536532 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643387596 |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_002272049 |
|---|
| Protein GI | 209399650 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0403112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGATTA TCGGTAGCGG CGCAGCCGGG CTTTCACTGG CGCTACGCCT GGCTGACCAG
CATCAGGTCA TCGTTCTAAG TAAAGGCCCG GTAACGGAAG GTTCAACATT TTATGCCCAG
GGCGGTATTG CCGCCGTGTT TGATGAAACT GACAGCATTG ACTCGCATGT GGAAGACACA
TTGATTGCCG GGGCTGGTAT TTGCGATCGC CATGCAGTTG AATTTGTCGC CAGCAATGCA
CGATCCTGTG TGCAATGGCT AATCGACCAG GGGGTGTTAT TTGATACCCA CATTCAGCCG
AATGGCGAAG AAAGCTACCA TCTGACCCGT GAAGGTGGAC ATAGTCACCG TCGTATTCTT
CATGCCGCCG ACGCAACTGG TAGAGAAGTA GAAACCACGC TGGTGAGCAA GGCGCTGAAC
CATCCGAATA TTCGCGTGCT GGAGCGCAGC AACGCGGTTG ATCTGATTAT TTCTGACAAA
ATTGGCCTGC CGGGCACGCG ACGGGTTGTT GGCGCGTGGG TATGGAACCG AAATAAAGAA
AAGGTGGAAA CCTGCCACGC AAAAGCGGTG GTGCTGGCAA CCGGCGGTGC GTCGAAGGTT
TATCAGTACA CCACCAATCC GGATATTTCT TCTGGCGATG GCATTGCTAT GGCGTGGCGC
GCAGGCTGCC GGGTTGCCAA TCTCGAATTT AATCAGTTCC ACCCTACCGC GCTGTATCAC
CCACAGGCAC GCAATTTCCT GTTAACGGAA GCACTGCGCG GCGAAGGCGC TTATCTCAAG
CGCCCGGATG GCACGCGTTT TATGCCCGAT TTTGATGTGC GCGGCGAACT GGCCCCGCGC
GATATTGTCG CCCGCGCCAT TGACCATGAA ATGAAACGCC TCGGCGCAGA TTGTATGTTC
CTTGATATCA GCCATAAGCC CGCCGATTTT ATTCGCCAGC ATTTTCCGAT GATTTATGAA
AAGCTGCTCG GGCTGGGGAT TGATCTCACA CAAGAACCGG TACCGATTGT GCCTGCTGCA
CATTATACCT GCGGTGGTGT AATGGTTGAT GATCATGGGC GTACGGACGT CGAGGGCTTG
TATGCCATTG GCGAGGTGAG TTATACCGGC TTACACGGCG CTAACCGCAT GGCCTCGAAT
TCATTGCTGG AGTGTCTGGT CTATGGCTGG TCGGCGGCGG AAGATATCAC CAGACGTATG
CCTTATGCCC ACGACATCAG TACGTTACCG CCGTGGGATG AAAGCCGCGT TGAGAACCCT
GACGAACGGG TAATAATTCA GCATAACTGG CACGAGCTAC GTCTGTTTAT GTGGGATTAC
GTTGGCATTG TGCGCACAAC GAAGCGCCTG GAACGCGCCC TGCGGCGGAT AACCATGCTC
CAACAAGAAA TAGACGAATA TTACGCCCAT TTCCGCGTCT CAAATAATTT GCTGGAGCTG
CGTAATCTGG TACAGGTTGC CGAGTTGATT GTTCGCTGTG CAATGATGCG TAAAGAGAGT
CGGGGGTTGC ATTTCACGCT GGATTATCCG GAACTGCTCA CCCATTCCGG TCCGTCGATC
CTTTCTCCCG GCAATCATTA CATAAACAGA TAA
|
|---|
| Protein sequence | MLIIGSGAAG LSLALRLADQ HQVIVLSKGP VTEGSTFYAQ GGIAAVFDET DSIDSHVEDT
LIAGAGICDR HAVEFVASNA RSCVQWLIDQ GVLFDTHIQP NGEESYHLTR EGGHSHRRIL
HAADATGREV ETTLVSKALN HPNIRVLERS NAVDLIISDK IGLPGTRRVV GAWVWNRNKE
KVETCHAKAV VLATGGASKV YQYTTNPDIS SGDGIAMAWR AGCRVANLEF NQFHPTALYH
PQARNFLLTE ALRGEGAYLK RPDGTRFMPD FDVRGELAPR DIVARAIDHE MKRLGADCMF
LDISHKPADF IRQHFPMIYE KLLGLGIDLT QEPVPIVPAA HYTCGGVMVD DHGRTDVEGL
YAIGEVSYTG LHGANRMASN SLLECLVYGW SAAEDITRRM PYAHDISTLP PWDESRVENP
DERVIIQHNW HELRLFMWDY VGIVRTTKRL ERALRRITML QQEIDEYYAH FRVSNNLLEL
RNLVQVAELI VRCAMMRKES RGLHFTLDYP ELLTHSGPSI LSPGNHYINR
|
|---|
| |