| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3736 |
|---|
| Symbol | |
|---|
| ID | 6970827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 3457732 |
|---|
| End bp | 3458910 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643387529 |
|---|
| Product | outer membrane protein assembly complex subunit YfgL |
|---|
| Protein accession | YP_002271982 |
|---|
| Protein GI | 209398578 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1520] FOG: WD40-like repeat |
|---|
| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.550553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTGC GTAAATTACT GCTGCCAGGA CTGCTTTCCG TTACCCTTTT AAGCGGCTGT
TCGCTGTTTA ACAGCGAAGA AGATGTGGTA AAGATGTCCC CATTGCCAAC CGTTGAAAAC
CAGTTTACGC CGACCACGGC GTGGAGCACT TCCGTTGGTA GCGGCATTGG CAACTTCTAT
TCCAATCTTC ATCCGGCACT GGCGGACAAC GTTGTCTATG CAGCGGACCG CGCTGGTTTA
GTAAAAGCGC TGAATGCGGA TGATGGCAAA GAAATCTGGT CTGTCAGCCT GGCCGAGAAA
GATGGCTGGT TCTCTAAAGA GCCTGCATTA CTTTCTGGCG GTGTGACCGT GTCTGGTGGA
CATGTCTACA TTGGCAGCGA AAAGGCGCAG GTTTACGCGC TGAATACCAG CGATGGTACT
GTGGCATGGC AAACTAAAGT CGCGGGTGAA GCACTTTCGC GCCCGGTGGT CAGCGACGGT
CTGGTGTTAA TCCACACCAG TAACGGTCAG TTACAAGCGC TGAACGAAGC TGACGGCGCT
GTCAAATGGA CAGTTAACCT CGATATGCCT TCGCTCTCTT TGCGTGGCGA GTCTGCGCCG
GCAACGGCTT TTGGTGCGGC CGTCGTGGGG GGCGATAATG GTCGCGTCAG CGCAGTGCTG
ATGGAACAGG GCCAGATGAT TTGGCAGCAG CGTATTTCCC AAGCGACCGG TTCTACCGAA
ATTGACCGTC TGAGCGATGT TGACACGACT CCCGCCGTTG TTAACGGCGT TGTTTTCGCG
CTGGCCTATA ATGGTAACCT GACGGCGCTT GATCTGCGCA GTGGTCAGAT TATGTGGAAA
CGCGAACTGG GTTCGGTGAA TGATTTCATC GTCGACGGCA ATCGCATCTA TCTGGTCGAT
CAAAATGACC GGGTGATGGC GTTGACCATT GATGGCGGCG TTACGCTGTG GACACAAAGC
GATCTGCTGC ATCGCCTGCT GACTTCTCCG GTGCTGTATA ATGGCAACCT GGTGGTCGGT
GACAGTGAAG GTTATTTGCA CTGGATTAAC GTCGAAGATG GTCGTTTCGT TGCCCAGCAA
AAAGTTGATA GTTCCGGTTT CCAGACTGAA CCGGTTGCCG CTGACGGCAA ACTGCTGATC
CAGGCAAAAG ACGGAACCGT GTACTCTATT ACACGTTAA
|
|---|
| Protein sequence | MQLRKLLLPG LLSVTLLSGC SLFNSEEDVV KMSPLPTVEN QFTPTTAWST SVGSGIGNFY
SNLHPALADN VVYAADRAGL VKALNADDGK EIWSVSLAEK DGWFSKEPAL LSGGVTVSGG
HVYIGSEKAQ VYALNTSDGT VAWQTKVAGE ALSRPVVSDG LVLIHTSNGQ LQALNEADGA
VKWTVNLDMP SLSLRGESAP ATAFGAAVVG GDNGRVSAVL MEQGQMIWQQ RISQATGSTE
IDRLSDVDTT PAVVNGVVFA LAYNGNLTAL DLRSGQIMWK RELGSVNDFI VDGNRIYLVD
QNDRVMALTI DGGVTLWTQS DLLHRLLTSP VLYNGNLVVG DSEGYLHWIN VEDGRFVAQQ
KVDSSGFQTE PVAADGKLLI QAKDGTVYSI TR
|
|---|
| |