Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3666 |
Symbol | hemF |
ID | 6968811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 3380445 |
End bp | 3381344 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643387460 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_002271913 |
Protein GI | 209395878 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0408] Coproporphyrinogen III oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.936359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCG ACGCACACCA GGTTAAACAG TTTCTGCTCA ACCTTCAGGA TACGATTTGT CAGCAGCTGA CCGCCGTCGA TGGCGCAGAA TTTGTCGAAG ATAGCTGGCA GCGCGAAGGT GGCGGCGGCG GGCGTAGTCG GGTGTTGCGT AATGGTGGTG TTTTCGAACA GGCAGGCGTC AACTTTTCTC ACGTCCACGG CGAGGCGATG CCTGCTTCCG CCACCGCTCA TCGCCCGGAA CTTGCCGGGC GCAGTTTCGA GGCGATGGGC GTTTCTCTGG TAGTGCATCC GCATAATCCG TATGTTCCCA CCAGCCACGC GAATGTGCGC TTTTTTATTG CCGAAAAACC GGGTGCAGAG CCAGTCTGGT GGTTTGGCGG CGGCTTCGAT TTAACCCCTT TCTATGGTTT TGAAGAAGAC GCCATTCACT GGCACCGCAC CGCCCGTGAC CTGTGCCTGC CATTTGGTAA AGACGTTTAT CCCCGTTACA AAAAGTGGTG CGACGATTAC TTCTACCTCA AACATCGCAA CGAACAGCGC GGTATTGGCG GGCTGTTCTT TGATGATCTA AACACGCCAG ATTTCGACCA CTGTTTTGCC TTTATGCAGG CGGTAGGCAA AGGCTACACC GACGCTTATT TACCAATTGT AGAGCGACGT AAAGCGATGG CCTACGGCGA GCGCGAGCGC AATTTTCAGC TCTACCGTCG CGGTCGTTAT GTCGAGTTCA ATCTGGTCTG GGATCGCGGC ACTCTGTTTG GCCTGCAAAC TGGCGGGCGC ACCGAGTCGA TCCTGATGTC AATGCCGCCA CTGGTACGCT GGGAGTATGA TTATCAGCCA AAAGATGGCA GCCCAGAAGC GGCGTTAAGT GAGTTTATTA AGGTCAGGGA TTGGGTGTAA
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Protein sequence | MKPDAHQVKQ FLLNLQDTIC QQLTAVDGAE FVEDSWQREG GGGGRSRVLR NGGVFEQAGV NFSHVHGEAM PASATAHRPE LAGRSFEAMG VSLVVHPHNP YVPTSHANVR FFIAEKPGAE PVWWFGGGFD LTPFYGFEED AIHWHRTARD LCLPFGKDVY PRYKKWCDDY FYLKHRNEQR GIGGLFFDDL NTPDFDHCFA FMQAVGKGYT DAYLPIVERR KAMAYGERER NFQLYRRGRY VEFNLVWDRG TLFGLQTGGR TESILMSMPP LVRWEYDYQP KDGSPEAALS EFIKVRDWV
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