| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3444 |
|---|
| Symbol | |
|---|
| ID | 6970258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 3189240 |
|---|
| End bp | 3190133 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643387250 |
|---|
| Product | NAD dependent epimerase/dehydratase family protein |
|---|
| Protein accession | YP_002271713 |
|---|
| Protein GI | 209400621 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
|---|
| TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0131327 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATAG TGATCACCGG AGGGACGGGA TTAATTGGTC GCCATTTGAT TCCACGTTTG
CTGGAGCTGG GCCATCAAAT CACGGTAATG ACGCGTAACC CGCAGAAAGC CAGTTCCGTT
CTCGGCCCTC GGGTGACACT ATGGCAAGGG CTTGCCGATC AAAGCAACCT CAACGGCATT
GATGCGGTAA TCAACCTGGC CGGAGAACCG ATTGCTGATA AACGTTGGAC TCACGAGCAA
AAAGAGCGTC TCTGCCAAAG CCGCTGGAAT ATCACGCAAA AACTGGTCGA TTTGATTAAT
GCCAGCGACA CGCCACCGTC GGTACTCATT TCCGGCTCGG CAACGGGCTA TTATGGCGAC
TTAGGTGAAG TGGTGGTTAC CGAAGAGGAA CCGCCGCATA ACAAATTTAC CCATAAACTC
TGCGCCCGCT GGGAAGAAAT TGCCTGTCGG GCGCAAAGTG ACAAAACGCG AGTGTGCCTG
CTGCGTACCG GCGTAGTGCT GGCACCGGAT GGCGGTATTC TCGGTAAAAT GCTGCCGCCG
TTTCGTCTTG GCCTGGGCGG GCCGATTGGT TCCGGTCGGC AGTATCTGGC CTGGATTCAT
ATCGATGATA TGGTCAACGG CATTCTCTGG CTGCTGGATA ACGAGCTGCG CGGGCCATTT
AATATGGTTT CGCCCTACCC GATACGCAAT GAACAATTTG CCCATGCGCT CGGTCATGCG
CTGCATCGCC CGGCTATTTT GCGCGTCCCC GCAACCGCCA TTCGGCTGTT AATGGGCGAA
TCTTCAGTAC TGGTATTAGG TGGACAACGC GCGCTGCCTA AACGGCTGGA AGAAGCGGGT
TTTGCGTTTC GCTGGTACGA TTTAGAAGAG GCGCTGGCGG ATGTCGTTCG CTGA
|
|---|
| Protein sequence | MNIVITGGTG LIGRHLIPRL LELGHQITVM TRNPQKASSV LGPRVTLWQG LADQSNLNGI
DAVINLAGEP IADKRWTHEQ KERLCQSRWN ITQKLVDLIN ASDTPPSVLI SGSATGYYGD
LGEVVVTEEE PPHNKFTHKL CARWEEIACR AQSDKTRVCL LRTGVVLAPD GGILGKMLPP
FRLGLGGPIG SGRQYLAWIH IDDMVNGILW LLDNELRGPF NMVSPYPIRN EQFAHALGHA
LHRPAILRVP ATAIRLLMGE SSVLVLGGQR ALPKRLEEAG FAFRWYDLEE ALADVVR
|
|---|
| |