Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3388 |
Symbol | |
ID | 6970405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3132084 |
End bp | 3133289 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643387196 |
Product | mandelate racemase/muconate lactonizing enzyme family protein |
Protein accession | YP_002271659 |
Protein GI | 209398974 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCTAC CAAAAATTAA ACAGGTTCGC GCCTGGTTTA CTGGCGGTGC GACAGCAGAA AAAGGCGCTG GCGGCGGTGA TTATCACGAC CAGGGGGCGA ATCACTGGAT AGACGATCAT ATTGCCACCC CGATGAGTAA ATACCGCGAT TACGAGCAGT TACGCCAGTC ATTTGGCATT AACGTTCTTG GCACGTTGGT TGTTGAAGTC GAAGCAGAAA ACGGCCAGAC CGGATTCGCT GTTTCGACAG CCGGTGAAAT GGGCTGTTTT ATCGTCGAAA AACACCTTAA CCGTTTCATT GAGGGTAAAT GTGTCAGTGA TATCAAACTG ATCCATGATC AAATGCTCAA TGCCACCCTG TATTACTCCG GCTCTGGTGG CCTGGTGATG AACACGATTT CCTGTGTCGA TCTGGCTCTG TGGGATCTGT TCGGCAAAGT GGTCGGGCTT CCGGTTTATA AACTTTTAGG CGGCGCTGTT CGTGATGAGA TTCAGTTCTA CGCCACAGGT GCGCGTCCGG ATCTGGCAAA AGAGATGGGC TTTATCGGTG GCAAAATGCC GACGCACTGG GGGCCACATG ATGGCGATGC GGGGATCCGC AAAGATGCCG CTATGGTCGC GGATATGCGT GAAAAATGCG GTGAGGATTT CTGGTTAATG CTCGACTGCT GGATGAGTCA GGACGTGAAC TATGCGACCA AACTGGCCCA CGCTTGCGCG CCCTATAACC TGAAATGGAT CGAAGAGTGC CTGCCGCCAC AGCAGTATGA AGGTTATCGC GAACTGAAAC GCAACGCGCC AGTCGGAATG ATGGTCACCA GCGGTGAGCA CCACGGCACA CTGCAATCTT TTCGTACGCT TTCAGAAACC GGTATCGACA TTATGCAGCC GGATGTTGGC TGGTGCGGTG GCTTAACCAC GCTGGTGGAA ATTGCCGCAA TCGCCAAATC CAGGGGGCAA CTGGTGGTGC CGCACGGTTC GTCTGTTTAC TCCCACCATG CGGTGATCAC CTTCACTAAT ACGCCATTCA GCGAATTCCT GATGACTAGT CCGGATTGTT CAACGATGCG TCCGCAGTTT GACCCGATTC TGCTCAATGA GCCGGTTCCG GTGAATGGTC GTATTCATAA ATCAGTGCTT GATAAACCCG GTTTTGGCGT CGAACTCAAT CGTGACTGCA ATTTGAAACG CCCCTACAGC CACTAA
|
Protein sequence | MTLPKIKQVR AWFTGGATAE KGAGGGDYHD QGANHWIDDH IATPMSKYRD YEQLRQSFGI NVLGTLVVEV EAENGQTGFA VSTAGEMGCF IVEKHLNRFI EGKCVSDIKL IHDQMLNATL YYSGSGGLVM NTISCVDLAL WDLFGKVVGL PVYKLLGGAV RDEIQFYATG ARPDLAKEMG FIGGKMPTHW GPHDGDAGIR KDAAMVADMR EKCGEDFWLM LDCWMSQDVN YATKLAHACA PYNLKWIEEC LPPQQYEGYR ELKRNAPVGM MVTSGEHHGT LQSFRTLSET GIDIMQPDVG WCGGLTTLVE IAAIAKSRGQ LVVPHGSSVY SHHAVITFTN TPFSEFLMTS PDCSTMRPQF DPILLNEPVP VNGRIHKSVL DKPGFGVELN RDCNLKRPYS H
|
| |