Gene ECH74115_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3388 
Symbol 
ID6970405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3132084 
End bp3133289 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content52% 
IMG OID643387196 
Productmandelate racemase/muconate lactonizing enzyme family protein 
Protein accessionYP_002271659 
Protein GI209398974 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTAC CAAAAATTAA ACAGGTTCGC GCCTGGTTTA CTGGCGGTGC GACAGCAGAA 
AAAGGCGCTG GCGGCGGTGA TTATCACGAC CAGGGGGCGA ATCACTGGAT AGACGATCAT
ATTGCCACCC CGATGAGTAA ATACCGCGAT TACGAGCAGT TACGCCAGTC ATTTGGCATT
AACGTTCTTG GCACGTTGGT TGTTGAAGTC GAAGCAGAAA ACGGCCAGAC CGGATTCGCT
GTTTCGACAG CCGGTGAAAT GGGCTGTTTT ATCGTCGAAA AACACCTTAA CCGTTTCATT
GAGGGTAAAT GTGTCAGTGA TATCAAACTG ATCCATGATC AAATGCTCAA TGCCACCCTG
TATTACTCCG GCTCTGGTGG CCTGGTGATG AACACGATTT CCTGTGTCGA TCTGGCTCTG
TGGGATCTGT TCGGCAAAGT GGTCGGGCTT CCGGTTTATA AACTTTTAGG CGGCGCTGTT
CGTGATGAGA TTCAGTTCTA CGCCACAGGT GCGCGTCCGG ATCTGGCAAA AGAGATGGGC
TTTATCGGTG GCAAAATGCC GACGCACTGG GGGCCACATG ATGGCGATGC GGGGATCCGC
AAAGATGCCG CTATGGTCGC GGATATGCGT GAAAAATGCG GTGAGGATTT CTGGTTAATG
CTCGACTGCT GGATGAGTCA GGACGTGAAC TATGCGACCA AACTGGCCCA CGCTTGCGCG
CCCTATAACC TGAAATGGAT CGAAGAGTGC CTGCCGCCAC AGCAGTATGA AGGTTATCGC
GAACTGAAAC GCAACGCGCC AGTCGGAATG ATGGTCACCA GCGGTGAGCA CCACGGCACA
CTGCAATCTT TTCGTACGCT TTCAGAAACC GGTATCGACA TTATGCAGCC GGATGTTGGC
TGGTGCGGTG GCTTAACCAC GCTGGTGGAA ATTGCCGCAA TCGCCAAATC CAGGGGGCAA
CTGGTGGTGC CGCACGGTTC GTCTGTTTAC TCCCACCATG CGGTGATCAC CTTCACTAAT
ACGCCATTCA GCGAATTCCT GATGACTAGT CCGGATTGTT CAACGATGCG TCCGCAGTTT
GACCCGATTC TGCTCAATGA GCCGGTTCCG GTGAATGGTC GTATTCATAA ATCAGTGCTT
GATAAACCCG GTTTTGGCGT CGAACTCAAT CGTGACTGCA ATTTGAAACG CCCCTACAGC
CACTAA
 
Protein sequence
MTLPKIKQVR AWFTGGATAE KGAGGGDYHD QGANHWIDDH IATPMSKYRD YEQLRQSFGI 
NVLGTLVVEV EAENGQTGFA VSTAGEMGCF IVEKHLNRFI EGKCVSDIKL IHDQMLNATL
YYSGSGGLVM NTISCVDLAL WDLFGKVVGL PVYKLLGGAV RDEIQFYATG ARPDLAKEMG
FIGGKMPTHW GPHDGDAGIR KDAAMVADMR EKCGEDFWLM LDCWMSQDVN YATKLAHACA
PYNLKWIEEC LPPQQYEGYR ELKRNAPVGM MVTSGEHHGT LQSFRTLSET GIDIMQPDVG
WCGGLTTLVE IAAIAKSRGQ LVVPHGSSVY SHHAVITFTN TPFSEFLMTS PDCSTMRPQF
DPILLNEPVP VNGRIHKSVL DKPGFGVELN RDCNLKRPYS H