Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3338 |
Symbol | ccmA |
ID | 6971418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3071936 |
End bp | 3072553 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643387150 |
Product | cytochrome c biogenesis protein CcmA |
Protein accession | YP_002271613 |
Protein GI | 209396482 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTGAAG TCAGAGAGTT ACTTTGTGAG CGGGATGAAC GAACCTTATT TAGTGGCTTG TCATTTACGC TGAACGCAGG AGAGTGGGTA CAAATCACCG GTAGCAACGG CGCGGGGAAG ACAACGCTTC TCCGTTTGCT GACGGGGTTG TCTCGCCCTG ACGCAGGCGA GGTTCTCTGG CAAGGGCAGC CCTTGCATCA GGTACGCGAC AGCTACCATC AAAACCTGTT ATGGATAGGC CATCAGCCGG GGATCAAAAC CCGGCTGACG GCGTTAGAAA ATCTGCACTT TTATCATCGC GATGGCGATA CCGCACAATG TCTGGAAGCC CTGGCGCAGG CCGGGCTTGC CGGATTCGAA GATATTCCGG TAAATCAACT TTCTGCCGGG CAACAACGCC GCGTCGCTTT AGCGCGTCTG TGGCTGACCC GTGCCACGTT ATGGATCCTC GACGAGCCTT TTACCGCGAT TGACGTTAAC GGCGTCGATC GTCTGACCCA GCGTATGGCG CAGCATACAG AGCAGGGGGG GATTGTGATT CTCACTACCC ACCAGCCGCT CAACGTTGCT GAAAGTAAAA TTCGCCGCAT TTCACTGACG CAAACGAGGG CCGTATGA
|
Protein sequence | MLEVRELLCE RDERTLFSGL SFTLNAGEWV QITGSNGAGK TTLLRLLTGL SRPDAGEVLW QGQPLHQVRD SYHQNLLWIG HQPGIKTRLT ALENLHFYHR DGDTAQCLEA LAQAGLAGFE DIPVNQLSAG QQRRVALARL WLTRATLWIL DEPFTAIDVN GVDRLTQRMA QHTEQGGIVI LTTHQPLNVA ESKIRRISLT QTRAV
|
| |