Gene ECH74115_3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3320 
Symbolbcr 
ID6967131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3054862 
End bp3056052 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content53% 
IMG OID643387132 
Productbicyclomycin/multidrug efflux system 
Protein accessionYP_002271596 
Protein GI209398488 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0589131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.334809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCC GACAGCATTC GTCGTTTGCT ATTGTTTTTA TCCTTGGCCT GCTGGCCATG 
TTGATGCCGC TGTCGATTGA TATGTATCTG CCCGCGCTAC CGGTAATTTC AGCGCAGTTT
GGCGTACCGG CGGGCAGTAC GCAGATGACC CTCAGTACTT ATATTCTGGG CTTTGCGTTG
GGGCAGTTAA TCTACGGGCC GATGGCAGAC AGCTTCGGGC GTAAGCCGGT GGTTCTTGGC
GGTACGCTGG TGTTTGCCGC CGCCGCGGTG GCGTGTGCGT TGGCACAAAC CATCGATCAG
CTGATTGTGA TGCGTTTCTT CCACGGGCTG GCGGCGGCTG CGGCCAGCGT GGTTATCAAC
GCTTTGATGC GTGATATCTA CCCGAAAGAA GAGTTCTCGC GGATGATGTC GTTTGTCATG
CTGGTGACGA CCATTGCACC GCTGATGGCA CCGATAGTTG GCGGCTGGGT GCTGGTGTGG
CTGAGCTGGC ATTACATCTT CTGGATCCTC GCCGTGGCGG CGATTCTGGC TTCGGCAATG
ATCTTCTTTC TGATCAAAGA AACCTTACCA CCGGAGCGTC GCCAGCCTTT TCACATTCGT
ACCACTATTG GTAACTTTGC GGCGCTGTTC CGTCATAAGC GTGTCCTGAG TTATATGCTG
GCCAGTGGTT TCAGCTTTGC CGGGATGTTC TCGTTCTTAA GCGCCGGACC GTTTGTCTAC
ATTGAAATTA ACCACGTCGC GCCGGAAAAC TTTGGTTATT ACTTTGCACT AAACATTGTT
TTCCTGTTCG TGATGACCAT CTTTAATAGC CGCTTCGTCC GCCGTATTGG CGCGTTAAAT
ATGTTCCGCT CGGGGTTGTG GATACAATTT ATTATGGCAG CGTGGATGGT CATCAGTGCG
CTGCTGGGTC TGGGATTTTG GTCGCTGGTG GTTGGCGTTG CGGCGTTTGT GGGCTGCGTG
TCGATGGTGT CATCCAATGC GATGGCGGTC ATTCTTGATG AGTTTCCCCA TATGGCGGGA
ACGGCATCTT CGCTGGCAGG AACCTTCCGT TTTGGCATAG GGGCAATTGT TGGCGCATTG
CTTTCTCTTG CGACCTTTAA CTCTGCATGG CCGATGATTT GGTCAATTGC ATTCTGCGCA
ACCAGCTCCA TTCTCTTCTG TCTGTACGCC AGTCGGCCGA AAAAACGGTG A
 
Protein sequence
MTTRQHSSFA IVFILGLLAM LMPLSIDMYL PALPVISAQF GVPAGSTQMT LSTYILGFAL 
GQLIYGPMAD SFGRKPVVLG GTLVFAAAAV ACALAQTIDQ LIVMRFFHGL AAAAASVVIN
ALMRDIYPKE EFSRMMSFVM LVTTIAPLMA PIVGGWVLVW LSWHYIFWIL AVAAILASAM
IFFLIKETLP PERRQPFHIR TTIGNFAALF RHKRVLSYML ASGFSFAGMF SFLSAGPFVY
IEINHVAPEN FGYYFALNIV FLFVMTIFNS RFVRRIGALN MFRSGLWIQF IMAAWMVISA
LLGLGFWSLV VGVAAFVGCV SMVSSNAMAV ILDEFPHMAG TASSLAGTFR FGIGAIVGAL
LSLATFNSAW PMIWSIAFCA TSSILFCLYA SRPKKR