| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3073 |
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| Symbol | gatA |
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| ID | 6970692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 2844933 |
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| End bp | 2845385 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643386905 |
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| Product | PTS system galactitol-specific transporter subunit IIA |
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| Protein accession | YP_002271373 |
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| Protein GI | 209398381 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.000478831 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACTAACC TGTTTGTTCG TAGCGGAATT TCTTTTGTCG ATCGTAGCGA AGTTTTAACC
CATATCGGTA ATGAGATGCT CGCCAAAGGT GTGGTTCATG ATACCTGGCC ACAGGCATTA
ATTGCCAGAG AAGCAGAATT CCCTACCGGG ATAATGCTTG AGCAGCACGC CATTGCAATA
CCGCATTGTG AGGCGATTCA TGCTAAGTCG TCAGCCATTT ATCTGTTAAG GCCAACAAAT
AAAGTTCATT TTCAGCAAGC GGATGATGAT AATGACGTGG CGGTATCGTT GGTTATTGCG
TTGATTGTGG AAAATCCGCA GCAGCAATTG AAACTTTTAC GCTGTTTATT TGGCAAGTTA
CAACAGCCCG ATATCGTTGA GACACTAATC ACTCTTCCTG AAACTCAGTT AAAGGAATAC
TTCACAAAGT ATGTTTTAGA TTCAGACGAA TAA
|
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| Protein sequence | MTNLFVRSGI SFVDRSEVLT HIGNEMLAKG VVHDTWPQAL IAREAEFPTG IMLEQHAIAI
PHCEAIHAKS SAIYLLRPTN KVHFQQADDD NDVAVSLVIA LIVENPQQQL KLLRCLFGKL
QQPDIVETLI TLPETQLKEY FTKYVLDSDE
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