| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3002 |
|---|
| Symbol | dcd |
|---|
| ID | 6966814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 2782316 |
|---|
| End bp | 2782897 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643386842 |
|---|
| Product | deoxycytidine triphosphate deaminase |
|---|
| Protein accession | YP_002271310 |
|---|
| Protein GI | 209396549 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0717] Deoxycytidine deaminase |
|---|
| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.304986 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGT GTGACCGAGA TATTGAAGCC TGGCTTGATG AAGGCCGTTT GTCGATCAAC
CCACGTCCGC CAGTGGAGCG TATTAACGGC GCGACGGTGG ATGTACGCCT GGGCAATAAA
TTTCGTACCT TCCGTGGTCA CACGGCAGCG TTTATCGATC TGAGCGGTCC CAAAGATGAA
GTGAGCGCCG CGCTTGACCG CGTGATGAGC GATGAGATCG TTCTCGATGA AAGCGAGGCG
TTCTATCTTC ACCCAGGAGA GCTGGCGCTG GCGGTGACGC TGGAGTCGGT GACGCTGCCA
GCCGATCTGG TGGGCTGGCT GGACGGGCGT TCCTCACTGG CGCGTCTGGG GCTGATGGTG
CACGTCACCG CGCACCGTAT CGATCCGGGC TGGTCTGGTT GCATTGTGCT GGAGTTCTAC
AACTCCGGTA AGCTGCCGCT GGCGCTGCGT CCGGGCATGT TAATTGGTGC GCTGAGCTTT
GAGCCGCTTT CCGGCCCGGC GGCGCGACCT TACAACCGCC GTGAAGATGC GAAGTATCGC
AACCAGCAGG GCGCGGTAGC CAGCCGAATC GATAAAGACT AA
|
|---|
| Protein sequence | MRLCDRDIEA WLDEGRLSIN PRPPVERING ATVDVRLGNK FRTFRGHTAA FIDLSGPKDE
VSAALDRVMS DEIVLDESEA FYLHPGELAL AVTLESVTLP ADLVGWLDGR SSLARLGLMV
HVTAHRIDPG WSGCIVLEFY NSGKLPLALR PGMLIGALSF EPLSGPAARP YNRREDAKYR
NQQGAVASRI DKD
|
|---|
| |