Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2913 |
Symbol | |
ID | 6967706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 2699844 |
End bp | 2700566 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643386757 |
Product | Roi protein |
Protein accession | YP_002271225 |
Protein GI | 209400174 |
COG category | [S] Function unknown |
COG ID | [COG3645] Uncharacterized phage-encoded protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00203388 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00000000000553867 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATGAGC TGATAAATAG CAATGCCATC AAAATGACAA GCATTGAAAT CGCTGAGTTG GTGGGAAGCC AACACGGTAA TGTCAGAATA TCAATAGAAC GTCTGGCAAA GCGTGGGGTG ATTCAACTTC CTTCAATGCA AAAAGTTGAA AATAAACAAA CAATTAGCCC TAACAAATTC ACAAGCGTGT ATATATTCGA AGGCGAACAA GGTAAGCGAG ACAGCATTAT TGTCGTCGCT CAGTTGTCGC CGGAATTCAC CGCTCGCCTT GTTGACCGCT GGCGAGAACT CGAAGGGGCA ACCGCGAAAA TACCACAAAC CTTTTCTGAG GCATTGCGCC TTGCGGCCGA CCTTGAAGAC CAGAAGGCTG AACTGGAGAA ACAGCTTGCT CTCGCAGCAC CTAAAGTTGA GTTTGCCGAT CGAGTTGGCG AGGCCAGCGG AATTTTGATT GGAAACTTTG CAAAGGTTGT TGGTATTGGT CCAAACAAAC GGTTTGCGTG GATGCGCGAT CACAAAATCC TTATTGCTTC AGGTGCCCGG CGCAATGTGC CAATGCAGGA ATATATGGAT CGCGGCTATT TCACAGTGAA AGAAACAGCG GTCAATACAA ATCACGGAAT ACAGATATCG TTCACCACAA AAATCACCGG GCGTGGTCAA CAGTGGCTGA CAAGAAAGCT GCTAGATAAC GGAATGCTTA AAGTAACAGG GGAGGCTGCT TAA
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Protein sequence | MNELINSNAI KMTSIEIAEL VGSQHGNVRI SIERLAKRGV IQLPSMQKVE NKQTISPNKF TSVYIFEGEQ GKRDSIIVVA QLSPEFTARL VDRWRELEGA TAKIPQTFSE ALRLAADLED QKAELEKQLA LAAPKVEFAD RVGEASGILI GNFAKVVGIG PNKRFAWMRD HKILIASGAR RNVPMQEYMD RGYFTVKETA VNTNHGIQIS FTTKITGRGQ QWLTRKLLDN GMLKVTGEAA
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