Gene ECH74115_2752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2752 
Symbol 
ID6968212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2573524 
End bp2574174 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content39% 
IMG OID643386607 
Producthypothetical protein 
Protein accessionYP_002271086 
Protein GI209399884 
COG category[R] General function prediction only 
COG ID[COG3443] Predicted periplasmic or secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00135234 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.121988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGATTC GTCTTCACAA ACTGGCTGTT GCTTTAGGTG TCTTTATTGT TAGCGCTCCT 
GCCTTTTCGC ATGGTCATCA CTCACACGGC AAACCCTTAA CAGAGGTCGA ACAAAAAGCT
GCTAATGGTG TTTTTGATGA TGCCAATGTA CAAAACCGAA CGCTCAGTGA CTGGGATGGA
GTCTGGCAAT CCGTTTATCC TTTACTGCAA AGTGGCAAAC TTGCCCCCGT CTTTCAGAAG
AAAGCGGATG CAGATAAAAC TAAAACATTT GCTGAAATTA AAGATTATTA TCACAAAGGC
TATGCAACAG ATATCGAGAT GATTGGCATT GAGGACGGCA TTGTTGAATT CCATAGAAAT
AATGAAACAA CATCCTGTAA ATATGATTAC GATGGATACA AAATACTCAC CTATAAATCA
GGCAAGAAAG GCGTTCGTTA CTTATTCGAA TGTAAAGATC CTGAAAGCAA AGCCCCTAAA
TATATACAAT TTAGCGATCA TATAATTGCA CCACGAAAAT CATCTCATTT TCACATTTTT
ATGGGTAATG ATTCACAGCA ATCTTTATTA AATGAAATGG AAAACTGGCC AACGTATTAT
CCATATCAGT TGAGTAGCGA AGAAGTGGTC GAGGAAATGA TGTCTCATTG A
 
Protein sequence
MAIRLHKLAV ALGVFIVSAP AFSHGHHSHG KPLTEVEQKA ANGVFDDANV QNRTLSDWDG 
VWQSVYPLLQ SGKLAPVFQK KADADKTKTF AEIKDYYHKG YATDIEMIGI EDGIVEFHRN
NETTSCKYDY DGYKILTYKS GKKGVRYLFE CKDPESKAPK YIQFSDHIIA PRKSSHFHIF
MGNDSQQSLL NEMENWPTYY PYQLSSEEVV EEMMSH