| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2727 |
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| Symbol | fliR |
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| ID | 6969432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 2555050 |
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| End bp | 2555835 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643386588 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_002271067 |
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| Protein GI | 209399396 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00116197 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.508279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGCAGG TGACAAGCGA ACAATGGCTA TCCTGGTTAA GCCTGTACTT CTGGCCGTTA
CTGCGCGTGC TGGCGCTGAT CTCCACCGCG CCGATTCTGA GCGAACGCAG CGTACCGAAA
CGGGTAAAAC TGGGTCTGGC AATGATGATC ACGTTCGCCA TTGCCCCATC ATTACCTGCC
AACGATGTTC CTGTTTTTTC GTTCTTTGCT CTGTGGCTGG CCGTGCAGCA GATCCTGATC
GGCATTGCGC TTGGTTTTAC CATGCAATTT GCCTTTGCCG CTGTGCGAAC CGCTGGCGAA
ATTATCGGTC TGCAAATGGG GCTGTCATTT GCGACGTTTG TCGATCCGGC CAGCCATCTT
AATATGCCCG TTTTAGCGCG TATCATGGAT ATGCTGGCGT TACTGCTGTT CCTGACATTT
AACGGTCATT TATGGTTGAT TTCACTGCTG GTCGATACCT TTCACACCCT GCCGATTGGT
GGCGAACCGT TGAACAGCAA TGCGTTTCTG GCACTCACCA AAGCAGGGAG TTTGATTTTC
CTTAACGGGC TGATGCTGGC GTTACCGCTC ATTACTCTGC TGCTGACACT GAATCTGGCA
TTAGGTTTAC TTAATCGTAT GGCCCCGCAA TTATCCATTT TTGTTATTGG ATTTCCATTA
ACTCTGACTG TCGGCATCTC TTTAATGGCG GCATTAATGC CGTTAATTGC GCCTTTTTGC
GAACATTTAT TCAGTGAAAT TTTTAATTTG CTGGCTGATA TTATTAGTGA ATTGCCATTA
ATATAA
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| Protein sequence | MLQVTSEQWL SWLSLYFWPL LRVLALISTA PILSERSVPK RVKLGLAMMI TFAIAPSLPA
NDVPVFSFFA LWLAVQQILI GIALGFTMQF AFAAVRTAGE IIGLQMGLSF ATFVDPASHL
NMPVLARIMD MLALLLFLTF NGHLWLISLL VDTFHTLPIG GEPLNSNAFL ALTKAGSLIF
LNGLMLALPL ITLLLTLNLA LGLLNRMAPQ LSIFVIGFPL TLTVGISLMA ALMPLIAPFC
EHLFSEIFNL LADIISELPL I
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