| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2690 |
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| Symbol | sdiA |
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| ID | 6969782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 2525991 |
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| End bp | 2526713 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643386551 |
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| Product | DNA-binding transcriptional activator SdiA |
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| Protein accession | YP_002271030 |
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| Protein GI | 209399275 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0029365 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.0383701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGATA CGGATTTTTT CAGCTGGCGT CGCACGATGC TGTTGCGTTT TCAGAGGATG
GAGACCGCAG AAGAGGTCTA CCATGAAATT GAGCTTCAGG CTCAGCAGCT GGAGTACGAT
TACTATTCGT TATGTGTCCG CCACCCGGTA CCATTCACTC GACCTAAAGT GGCTTTCTAC
ACCAATTACC CTGAGGCGTG GGTTAGTTAT TATCAGGCAA AAAACTTTCT CGCAATTGAT
CCGGTGCTGA ACCCTGAAAA CTTTAGTCAG GGCCATCTAA TGTGGAATGA TGACTTATTC
AACGAAGCAC AGCCGTTATG GGAAGCCGCG CGCGCACATG GTTTACGCCG CGGTGTCACT
CAGTATTTAA TGCTGCCAAA CCGGGCGCTG GGCTTTTTGT CCTTTTCCCG TTGCAGCGCG
CGCGAAATAC CCATTCTTAG TGATGAACTG CAATTAAAAA TGCAGTTACT GGTGCGCGAA
AGTCTGATGG CTCTGATGCG TTTAAATGAT GAAATAGTGA TGACGCCAGA GATGAATTTC
AGCAAGCGCG AAAAAGAAAT TCTGAGGTGG ACGGCGGAAG GGAAGACATC AGCAGAGATA
GCGATGATTT TGTCAATCTC TGAGAATACG GTCAATTTCC ACCAGAAAAA CATGCAGAAA
AAAATTAATG CACCAAATAA GACCCAGGTT GCCTGTTACG CGGCCGCTAC TGGCTTAATT
TGA
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| Protein sequence | MQDTDFFSWR RTMLLRFQRM ETAEEVYHEI ELQAQQLEYD YYSLCVRHPV PFTRPKVAFY
TNYPEAWVSY YQAKNFLAID PVLNPENFSQ GHLMWNDDLF NEAQPLWEAA RAHGLRRGVT
QYLMLPNRAL GFLSFSRCSA REIPILSDEL QLKMQLLVRE SLMALMRLND EIVMTPEMNF
SKREKEILRW TAEGKTSAEI AMILSISENT VNFHQKNMQK KINAPNKTQV ACYAAATGLI
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