| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2636 |
|---|
| Symbol | araG |
|---|
| ID | 6967234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 2491001 |
|---|
| End bp | 2492515 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643386499 |
|---|
| Product | L-arabinose transporter ATP-binding protein |
|---|
| Protein accession | YP_002270981 |
|---|
| Protein GI | 209398046 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0000000000458478 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAGT CTACCCCGTA TCTCTCATTT CGCGGCATCG GTAAAACGTT TCCCGGCGTT
AAGGCGCTGA CGGATATTAG TTTTGACTGC TATGCCGGTC AGGTTCATGC GTTGATGGGT
GAAAATGGCG CAGGAAAATC AACTCTCTTA AAAATCCTCA GCGGCAACTA TGCGCCAACC
ACGGGTTCTG TAGTGATTAA TGGGCAGGAA ATGTCCTTTT CCGACACGAC CGCAGCACTT
AACGCGGGTG TGGCGATTAT TTACCAGGAA CTGCATCTCG TGCCGGAAAT GACCGTCGCG
GAAAACATCT ATCTCGGCCA GCTGCCGCAT AAAGGCGGCA TTGTGAATCG CTCATTGCTG
AATTATGAGG CGGGTTTACA ACTTAAACAT CTTGGTATGG ATATTGACCC GGACACGCCG
CTGAAATATC TCTCCATTGG TCAGTGGCAG ATGGTTGAAA TCGCCAAGGC GCTGGCGCGT
AACGCTAAAA TTATCGCCTT TGATGAGCCA ACCAGCTCCC TTTCTGCCCG CGAAATCGAC
AATCTTTTCC GCGTTATTCG TGAACTGCGA AAAGAGGGGC GGGTGATCTT ATACGTTTCT
CACCGTATGG AAGAAATATT TGCCCTCAGC GATGCCATCA CTGTCTTTAA AGATGGACGT
TATGTCAAAA CCTTTACCGA TATGCAGCAG GTTGACCACG ACGCGCTGGT GCAGGCGATG
GTCGGGCGCG ACATTGGCGA TATCTACGGC TGGCAACCGC GTAGTTATGG CGAGGAGCGC
CTGCGTCTTG ATGCTGTGAA AGCACCAGGC GTGCGTACGC CAATAAGTCT GGCGGTTCGC
AGTGGTGAAA TTGTTGGGCT GTTTGGTCTG GTAGGGGCGG GGCGTAGCGA ATTAATGAAA
GGCATGTTTG GCGGGACGCA AATCACCGCC GGTCAGGTTT ATATCGACCA ACAGCCGATC
GATATTCGTA AACCGAGCCA CGCCATTGCC GCAGGCATGA TGCTCTGCCC GGAAGATCGC
AAAGCGGAAG GCATTATTCC TGTGCACTCC GTTCGCGACA ATATCAACAT CAGTGCCAGA
CGTAAACATG TGCTCGGCGG TTGTGTAATC AACAACGGTT GGGAAGAAAA CAATGCCGAT
CACCACATTC GTTCGCTCAA CATCAAAACG CCGGGCGCTG AGCAACTGAT TATGAATCTC
TCAGGTGGAA ATCAGCAAAA AGCCATTCTG GGCCGCTGGT TATCGGAAGA GATGAAGGTC
ATTTTGCTGG ATGAACCTAC GCGCGGCATT GATGTTGGTG CTAAGCACGA AATATATAAC
GTGATTTATG CGCTGGCGGC GCAGGGTGTG GCGGTGCTGT TTGCCTCCAG CGACTTACCT
GAAGTCCTCG GCGTTGCCGA CCGGATTGTG GTGATGCGCG AAGGTGAAAT CGCCGGTGAA
TTGTTACACG AGCAGGCAGA TGAGCGTCAG GCACTGAGCC TTGCGATGCC TAAAGTCAGC
CAGGCAGTTG CCTGA
|
|---|
| Protein sequence | MQQSTPYLSF RGIGKTFPGV KALTDISFDC YAGQVHALMG ENGAGKSTLL KILSGNYAPT
TGSVVINGQE MSFSDTTAAL NAGVAIIYQE LHLVPEMTVA ENIYLGQLPH KGGIVNRSLL
NYEAGLQLKH LGMDIDPDTP LKYLSIGQWQ MVEIAKALAR NAKIIAFDEP TSSLSAREID
NLFRVIRELR KEGRVILYVS HRMEEIFALS DAITVFKDGR YVKTFTDMQQ VDHDALVQAM
VGRDIGDIYG WQPRSYGEER LRLDAVKAPG VRTPISLAVR SGEIVGLFGL VGAGRSELMK
GMFGGTQITA GQVYIDQQPI DIRKPSHAIA AGMMLCPEDR KAEGIIPVHS VRDNINISAR
RKHVLGGCVI NNGWEENNAD HHIRSLNIKT PGAEQLIMNL SGGNQQKAIL GRWLSEEMKV
ILLDEPTRGI DVGAKHEIYN VIYALAAQGV AVLFASSDLP EVLGVADRIV VMREGEIAGE
LLHEQADERQ ALSLAMPKVS QAVA
|
|---|
| |