Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2565 |
Symbol | |
ID | 6970217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 2423755 |
End bp | 2424252 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643386432 |
Product | GAF domain protein |
Protein accession | YP_002270914 |
Protein GI | 209397373 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1956] GAF domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000383818 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAA CAGAATTTTA CGCGGATTTA AATCGCGACT TTAACGCGCT GATGGCGGGA GAAACCAGTT TTCTGGCAAC GCTTGCGAAC ACCAGTGCGT TGTTATATGA GCGTCTCACT GACGTAAACT GGGCAGGTTT TTATTTGCTT GAGGACGATA CACTGGTGCT CGGACCATTT CAGGGCAAAA TTGCCTGTGT CCGGATACCC GTCGGGCGTG GCGTGTGCGG CACTGCGGTT GCCCGCAATC AAGTGCAGCG TATCGAGGAT GTTCATGCGT TTGACGGGCA TATTGCCTGT GATGCGGCGA GTAATTCTGA AATTGTTCTG CCGCTGGTGG TGAAAAATCA GATTATTGGT GTTCTCGACA TCGATAGTAC CGTCTTCGGT CGCTTTACAG ACGAGGACGA GCAAGGCTTA CGTCAGCTTG TGGCACAGCT TGAAAAAGTG CTTGCAACGA CGGATTACAA AAAATTCTTT GCGAGCGTCG CAGGATAA
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Protein sequence | MNKTEFYADL NRDFNALMAG ETSFLATLAN TSALLYERLT DVNWAGFYLL EDDTLVLGPF QGKIACVRIP VGRGVCGTAV ARNQVQRIED VHAFDGHIAC DAASNSEIVL PLVVKNQIIG VLDIDSTVFG RFTDEDEQGL RQLVAQLEKV LATTDYKKFF ASVAG
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