Gene ECH74115_2565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2565 
Symbol 
ID6970217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2423755 
End bp2424252 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content50% 
IMG OID643386432 
ProductGAF domain protein 
Protein accessionYP_002270914 
Protein GI209397373 
COG category[T] Signal transduction mechanisms 
COG ID[COG1956] GAF domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000383818 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA CAGAATTTTA CGCGGATTTA AATCGCGACT TTAACGCGCT GATGGCGGGA 
GAAACCAGTT TTCTGGCAAC GCTTGCGAAC ACCAGTGCGT TGTTATATGA GCGTCTCACT
GACGTAAACT GGGCAGGTTT TTATTTGCTT GAGGACGATA CACTGGTGCT CGGACCATTT
CAGGGCAAAA TTGCCTGTGT CCGGATACCC GTCGGGCGTG GCGTGTGCGG CACTGCGGTT
GCCCGCAATC AAGTGCAGCG TATCGAGGAT GTTCATGCGT TTGACGGGCA TATTGCCTGT
GATGCGGCGA GTAATTCTGA AATTGTTCTG CCGCTGGTGG TGAAAAATCA GATTATTGGT
GTTCTCGACA TCGATAGTAC CGTCTTCGGT CGCTTTACAG ACGAGGACGA GCAAGGCTTA
CGTCAGCTTG TGGCACAGCT TGAAAAAGTG CTTGCAACGA CGGATTACAA AAAATTCTTT
GCGAGCGTCG CAGGATAA
 
Protein sequence
MNKTEFYADL NRDFNALMAG ETSFLATLAN TSALLYERLT DVNWAGFYLL EDDTLVLGPF 
QGKIACVRIP VGRGVCGTAV ARNQVQRIED VHAFDGHIAC DAASNSEIVL PLVVKNQIIG
VLDIDSTVFG RFTDEDEQGL RQLVAQLEKV LATTDYKKFF ASVAG