Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2409 |
Symbol | aroD |
ID | 6967416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 2280693 |
End bp | 2281451 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643386280 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_002270762 |
Protein GI | 209399707 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0710] 3-dehydroquinate dehydratase |
TIGRFAM ID | [TIGR01093] 3-dehydroquinate dehydratase, type I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.607229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACCG TAACTGTAAA AGATCTCGTC ATTGGTACGG GCGCACCTAA AATCATCGTC TCGCTGATGG CGAAAGATAT CGCCCGAGTG AAATCCGAAG CTCTCGCCTA TCGTGAAGCG GACTTTGATA TTCTGGAATG GCGTGTGGAC CACTTTGCCG ACCTCTCCAA TGTGGAGTCT GTCATGGCGG CGGCAAAAAT TCTCCGTGAA ACCATGCCAG AAAAACCGCT GCTGTTTACC TTCCGCAGTG CCAAAGAAGG CGGCGAGCAG GCGATTTCCA CCGAGGCTTA TATTGCTCTC AATCGTGCAG CCATCGACAG CGGCCTGGTT GATATGATCG ATCTGGAGTT ATTTACCGGC GATGATCAGG TTAAAGAAAC CGTCGCCTAC GCCCACGCGC ATGATGTGAA AGTTGTCATG TCCAACCATG ACTTCCATAA AACGCCGGAA GCCGAAGAAA TCATTGCCCG TCTGCGCAAA ATGCAGTCCT TCGACGCCGA TATTCCTAAG ATTGCGCTGA TGCCGCAAAG TACCAGCGAT GTGCTGGCGT TGCTTGCCGC GACCCTGGAG ATGCAGGAGC AGTATGCCGA TCGTCCAATC ATCACGATGT CAATGGCAAA AACTGGCGTA ATTTCTCGTC TGGCTGGTGA AGTATTTGGC TCGGCGGCAA CTTTTGGTGC GGTAAAAAAA GCCTCTGCGC CAGGGCAAAT CTCGGTAAAT GATTTGCGCA CAGTATTAAC TATTTTACAT CAGGCATAA
|
Protein sequence | MKTVTVKDLV IGTGAPKIIV SLMAKDIARV KSEALAYREA DFDILEWRVD HFADLSNVES VMAAAKILRE TMPEKPLLFT FRSAKEGGEQ AISTEAYIAL NRAAIDSGLV DMIDLELFTG DDQVKETVAY AHAHDVKVVM SNHDFHKTPE AEEIIARLRK MQSFDADIPK IALMPQSTSD VLALLAATLE MQEQYADRPI ITMSMAKTGV ISRLAGEVFG SAATFGAVKK ASAPGQISVN DLRTVLTILH QA
|
| |