| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2395 |
|---|
| Symbol | sufD |
|---|
| ID | 6969229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 2266526 |
|---|
| End bp | 2267797 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643386268 |
|---|
| Product | cysteine desulfurase activator complex subunit SufD |
|---|
| Protein accession | YP_002270750 |
|---|
| Protein GI | 209397107 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
|---|
| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.087197 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.000115041 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGCT TACCGAACAG CAGTAACGCG CTGCAACAGT GGCATCACTT GTTTGAAGCT
GAAGGGACAA AACGCTCCCC GCAAGCACAG CAGCATTTAC AACAATTGCT GCGTACCGGA
CTGCCGACAC GTAAACATGA AAACTGGAAA TATACGCCGC TGGAAGGGCT GACCAATAGT
CAGTTTGTCA GCATTGCGGG AGAGATATCC CCACAGCAGC GAGATGCCTT AGCGTTAACG
TTAGACGCTG TGCGGCTGGT ATTTGTCGAT GGACGTTACG TGCCTGCGCT GAGCGATGCG
ACTGAAGGCA GCGGGTATGA AGTGAGCATT AACGACGACC GTCAGGGGTT ACCCGATGCT
ATTCAGGCGG AAGTGTTTCT GCATTTGACG GAAAGCCTGG CACAAAGCGT GACGCATATC
GCCGTGAAGC GCGGTCAACG GCCGGCAAAG CCATTGCTGT TAATGCATAT CACCCAGGGC
GTGGCAGGTG AAGAGGTGAA CACTGCCCAT TACCGACATC ATCTGGAGCT GGCGGAAGGT
GCCGAAGCAA CGGTGATCGA ACATTTTGTC AGCCTTAATG ATGCTCGTCA TTTTACCGGG
GCACGGTTCT CTATCAACGT CGCAGCGAAT GCCCACTTGC AGCATATCAA GCTGGCGTTT
GAAAACCCGC TCAGTCACCA CTTTGCCCAT AACGATTTGT TGCTGGCTGA CGATGCCACC
GCATTTAGCC ACAGTTTCCT GCTGGGTGGC GCAGTGTTAC GACACAACAC CAGTACGCAA
CTCAATGGCG AAAACTGCAC GCTGCGGATC AATAGCCTGG CGATGCCGGT GAAAAACGAG
GTGTGTGATA CCCGTACCTG GCTGGAACAC AATAAAGGTT TTTGTAACAG CCGACAGTTG
CACAAAACTA TCGTCAGCGA CAAAGGCCGC GCGGTATTTA ACGGTTTGAT CAACGTCGCG
CAGCACGCCA TCAAAACGGA TGGTCAGATG ACCAACAATA ATCTGCTGAT GGGCAAACTG
GCGGAAGTGG ATACGAAACC GCAGCTGGAA ATCTATGCAG ATGATGTGAA ATGCAGCCAC
GGCGCGACGG TGGGGCGTAT TGATGATGAA CAGATGTTCT ATCTGCGCTC GCGCGGGATC
AATCAGCAGG ATGCCCAGCA GATGATCATT TACGCCTTTG CTGCCGAACT GACGGAAGCA
CTGCGTGATG AGGGGCTTAA ACAGCAGGTG CTGACCCGAA TCGGTCAACG GCTGCCAGGA
GGTGCAAGAT GA
|
|---|
| Protein sequence | MAGLPNSSNA LQQWHHLFEA EGTKRSPQAQ QHLQQLLRTG LPTRKHENWK YTPLEGLTNS
QFVSIAGEIS PQQRDALALT LDAVRLVFVD GRYVPALSDA TEGSGYEVSI NDDRQGLPDA
IQAEVFLHLT ESLAQSVTHI AVKRGQRPAK PLLLMHITQG VAGEEVNTAH YRHHLELAEG
AEATVIEHFV SLNDARHFTG ARFSINVAAN AHLQHIKLAF ENPLSHHFAH NDLLLADDAT
AFSHSFLLGG AVLRHNTSTQ LNGENCTLRI NSLAMPVKNE VCDTRTWLEH NKGFCNSRQL
HKTIVSDKGR AVFNGLINVA QHAIKTDGQM TNNNLLMGKL AEVDTKPQLE IYADDVKCSH
GATVGRIDDE QMFYLRSRGI NQQDAQQMII YAFAAELTEA LRDEGLKQQV LTRIGQRLPG
GAR
|
|---|
| |