| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2222 |
|---|
| Symbol | |
|---|
| ID | 6969621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 2112421 |
|---|
| End bp | 2113290 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643386110 |
|---|
| Product | transposase, Mutator family |
|---|
| Protein accession | YP_002270597 |
|---|
| Protein GI | 209399234 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00694083 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0000000000000060867 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGTCTAATT CGTCAGATTC TGACCAGACG GTTCAGGCTG TACGCTTACC TGATGTCTCA
CCGGCGCTGG TATCGAAGGT CACCGATGCC GTTATGGAGC AGGTAGTCGA ATGGCAAAAC
CGGCCACTGG ATGCGGTCTA TCCCATTGTT TATCTTGACT GTATTGTCCT GAAGGTTCGG
CAGGACAGTC GCGTAATCAA TAAATCCGTA TTCCTCGCAC TGGGTATCAA TATCGAAGGC
CAGAAAGAGT TACTGGGTAT GTGGCTGGCC GAAAACGAGG GAGCGAAGTT CTGGCTCAAT
GTGCTGACTG AACTAAAAAA CCGCGGCCTG AACGATATTC TCATAGCCTG TGTCGACGGG
CTGAAAGGCT TCCCGGACGC TATCAACACG GTGTATCCGG AAGCCCGCAT CCAGCTGTGC
ATCGTGCATA TGGTGCGCAA CAGCCTGCGG TTCGTTTCCT GGAAGGACTA CAAAGCCGTC
ACCCGCGACC TGAAAGCCAT CTACCAGGCC CCCACAGAAG AAGCAGGCCA GCAGGCGCTG
GAAGCGTTCG CCAGCGCCTG GGACAGTCGC TACCCGCAGA TAAGCCGGAG CTGGCAGGCA
AACTGGACCA ACCTGGCGAT GTTCTTCGCT TACCCGGCAG ATATCCGCAA AGTCATCTAC
ACAACCAACG CCATCGAGTC GCTGAACAGC GTAATCCGGC ATGCCATCAA AAAACGCAAG
GTGTTCCCGA CGGATGACTC AGTGAAAAAG GTCGTGTGGC TGGCAATCCA GGCGGCTTCA
CAGAAATGGA CGATGCCACT GCGGGACTGG CGTATGGCAA TGAGCCGCTT TATTATCGAG
TTCGGTGACC GCCTGGACGG TCACTTCTGA
|
|---|
| Protein sequence | MSNSSDSDQT VQAVRLPDVS PALVSKVTDA VMEQVVEWQN RPLDAVYPIV YLDCIVLKVR
QDSRVINKSV FLALGINIEG QKELLGMWLA ENEGAKFWLN VLTELKNRGL NDILIACVDG
LKGFPDAINT VYPEARIQLC IVHMVRNSLR FVSWKDYKAV TRDLKAIYQA PTEEAGQQAL
EAFASAWDSR YPQISRSWQA NWTNLAMFFA YPADIRKVIY TTNAIESLNS VIRHAIKKRK
VFPTDDSVKK VVWLAIQAAS QKWTMPLRDW RMAMSRFIIE FGDRLDGHF
|
|---|
| |