| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2064 |
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| Symbol | |
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| ID | 6970938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 1958329 |
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| End bp | 1960437 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643385976 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_002270465 |
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| Protein GI | 209400664 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.201838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.0713545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACCG GATTACGTTT CACGCTGGAA GTGGACGGCC TGCCACCGGA CGCGTTTGCG
GTGGTCTCCT TTCATCTGAA CCAGTCACTC TCTTCACTTT TTTCCCTCGA CCTTTCTCTG
GTCAGTCAGC AGTTTCTTTC CCTTGAATTT GCGCAGGTGC TGGACAAAAT GGCCTACCTG
ACGGTATGGC AGGGCGATGA CGTACAGCGC CGGGTGAAAG GTGTGGTGAC CTGGTTTGAA
CTGGGGGAGA ACGACAAAAA CCAGATGCTG TACAGCATGA AGGTGTGCCC GCCGCTGTGG
CGCACAGGGC TGCGCCAGAA CTTCCGTATC TTCCAGAATG AGGACATCGA AAGCATACTC
GCTACGATCC TGAAAGAAAA CGGTGTGACC GAGTGGAGTC CGCTGTTCAG CGAGCCGCAT
CCTTCCCGTG AGTTTTGTGT CCAGTACGGC GAAACTGATT ACGATTTCCT GTGCCGGATG
GCGGCGGAGG AAGGCATCTT CTTTTATGAG GAGCACGCGC AAAAAAGTAT CGACCAGAGC
CTGGTCCTGT GCGACACCGT GCGTTATCTG CCGGAGTCCT TTGAGATCCC CTGGAACCCG
AACACCCGTA CCGAGGTGAG CACCCTATGC ATCAGCCAGT TCCGCTACAG CGCACAAATC
CGCCCTTCTT CCGTGGTGAC CAAGGACTAC ACCTTTAAAC GACCCGGCTG GGCAGGGCGT
TTTGATCAGG AAGGCCAGTA CCAGGATTAC CAGCGCACAC AGTATGAAGT GTATGACTAC
CCCGGACGTT TCAAGGGTGC CCACGGGCAG AACTTTGCCC GCTGGCAGAT GGATGGCTGG
CGCAACAACG CAGAAGTGGC GCGCGGAACA AGCCGTTCTC CGGAAATATG GCCGGGACGG
CGAATTGTGC TGACGGGGCA TCCGCAGGCG AACCTGAACC GGGAATGGCA GGTGGTGGCA
AGTGAACTGC ACGGCGAGCA GCCACAGGCG GTGCCGGGAC GCAGGGGTTC AGGTACCACG
CTGAATAACC ACTTTGCGGT AATACCGGCA GACCGGACAT GGCGACCACA GCCGTTGCTG
AAACCGCTGG TGGATGGCCC GCAGAGCGCC GTCGTGACGG GACCGGCAGG CGAGGAAATC
TTCTGCGACG AACATGGTCG CGTGCGGGTG AAATTTAACT GGGACCGCTA TAACCCGTCA
AACCAGGACA GTTCATGCTG GATCCGTGTG GCACAGGCGT GGGCAGGCAC CGGCTTTGGC
AACCTGGCGA TACCGCGTGT GGGTCAGGAG GTGATTGTGG ACTTCCTCAA CGGCGATCCG
GACCAGCCGA TTATTATGGG GCGTACCTAC CACCAGGAAA ACCGCACACC CGGCAGCCTG
CCGGGGACGA AGACGCAGAT GACCATTCGT TCGAAAAACT ATAAGGGCAG CGGGTTTAAT
GAACTGAAGT TTGACGATGC GACAGGGAAA GAACAGGTCT ACATCCACGC GCAGAAGAAC
ATGAACACCG AGGTGCTGAA TAACCGCACC ACGGATGTGA TAAACAACCA TGCTGAGACC
ATTGGCAACA ATCAGATGAT TGCGGTTACC AACAATCAGA TACAGACGGT GGGCGTTAAC
CAGATAGAGA CGGTGGGCAG TAACCAGATC ATTAACGTGG GTTCTGTTCA GGTGGAAACG
ATTGGACTTG TTCGTGCGCT GACCGTGGGC GTGGCGTACC AGACGACGGT AGGTGGCATT
ATGAACACTT CGGTGGCTCT GATGCAGTCC TCGCAGATCG GTTTGCATAA ATCGTTGAGG
GTCGGGCTGG GTTATGACGT CAAAGTCGGA AATAACGTTA CCTTCACCGT TGGTAAAACG
AAAAAGGATG ATACCGGGCA GACCGCGATT TACTCCGCCG GTGAGCATCT GGAGCTCTGC
TGTGGTAAGG CAAGGCTGGT GCTGACGAAG GACGGACAAA TTTTTCTCAA CGGCACAAAA
ATTCATTTGC AGGGTAAGGA GCAGGTTAAT GGTGACTCAC TGTTGATTAA CTGGAACTGT
GCAGCCTCGA AATCCCCACC GAAGACCCCT GATGAAAAGC AGGATACGCC GGATATGAGA
GAGTACTGA
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| Protein sequence | MSTGLRFTLE VDGLPPDAFA VVSFHLNQSL SSLFSLDLSL VSQQFLSLEF AQVLDKMAYL
TVWQGDDVQR RVKGVVTWFE LGENDKNQML YSMKVCPPLW RTGLRQNFRI FQNEDIESIL
ATILKENGVT EWSPLFSEPH PSREFCVQYG ETDYDFLCRM AAEEGIFFYE EHAQKSIDQS
LVLCDTVRYL PESFEIPWNP NTRTEVSTLC ISQFRYSAQI RPSSVVTKDY TFKRPGWAGR
FDQEGQYQDY QRTQYEVYDY PGRFKGAHGQ NFARWQMDGW RNNAEVARGT SRSPEIWPGR
RIVLTGHPQA NLNREWQVVA SELHGEQPQA VPGRRGSGTT LNNHFAVIPA DRTWRPQPLL
KPLVDGPQSA VVTGPAGEEI FCDEHGRVRV KFNWDRYNPS NQDSSCWIRV AQAWAGTGFG
NLAIPRVGQE VIVDFLNGDP DQPIIMGRTY HQENRTPGSL PGTKTQMTIR SKNYKGSGFN
ELKFDDATGK EQVYIHAQKN MNTEVLNNRT TDVINNHAET IGNNQMIAVT NNQIQTVGVN
QIETVGSNQI INVGSVQVET IGLVRALTVG VAYQTTVGGI MNTSVALMQS SQIGLHKSLR
VGLGYDVKVG NNVTFTVGKT KKDDTGQTAI YSAGEHLELC CGKARLVLTK DGQIFLNGTK
IHLQGKEQVN GDSLLINWNC AASKSPPKTP DEKQDTPDMR EY
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