Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1927 |
Symbol | eefA |
ID | 6969458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1819946 |
End bp | 1821067 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643385858 |
Product | multidrug efflux transport protein EefA |
Protein accession | YP_002270347 |
Protein GI | 209399008 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0000000645896 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGTATA TAGCAACATC TGTAGTGGCA ATGCTGCTCT TATCTGGTTG TGATAATACG CAAAGTAACA ATTCATCCCC GTCAGAAACA GAAGTCGGCG TTGTTACAGT CAAATCTCAA CCGGTCTCGG TAGTCAGTGA ATTAACCGGA CGCACCAGTG CTGCGCTCAG TGCCGAAGTA CGTCCGCAGG TTGGGGGAAT TATCCAGAAA CGCTTATTTA AGGAAGGTGA TCTGGTCAAG GCTGGACAGC CGCTCTACCA GATTGATGCG GCCAGTTATC AGGCTGCATG GAATGAAGCT CGGGCAGCAT TACAACAAGC ACAGGCACTG GTAAAAGCCG ATTGCCAGAA AGCGCAGCGT TATGCCCGAC TGGTGAAAGA GAACGGTGTT TCACAACAGG ATGCTGATGA TGCTCAGTCT ACCTGTGCAC AAGATAAAGC CAGTGTAGCG GCGAAAAAAG CCGCACTGGA AACTGCGCGC ATTAATCTTG ACTGGACCAC GGTAACCGCA CCGATTTCAG GGCGCATTGG CATTTCGTCG GTAACCCCTG GCGCACTGGT GACCGCGTCG CAAGATACAG CGTTAACGAC TATTCGTGGT CTGGATACAA TGTATGTCGA CCTCACTCGC TCCAGTGTCG ATTTATTACG TCTGCGTAAA CAGTCACTGG CGACCAACAG TGACACCATG AGCGTCTCAC TTATTCTGGA AGATGGCACA ACCTACAGCG AAAAAGGGCG TCTGGAACTC ACCGAAGTCG CTGTAGATGA GTCTACCGGT TCGGTGACAT TACGGGCGAT TTTCCCCAAT CCACAACAGC AATTATTACC GGGAATGTTT GTTCGCGCTC GTGTCGATGA AGGCGTGATG GAAGACGCTA TTCTCGCGCC GCAACAGGGC GTCACGCGCG ATGCTAAAGG CAATGCAACT GCGCTGGTGG TGAATAAAGA CAATAAAGTA GAGCAGCGAA CGCTCGAAAC GGGAGAAACA TATGGTGATA AATGGCTGGT GCTAAACGGC CTGCACAGCG GCGACCGACT GATTGTTGAA GGTTCTGCCA AAGTCACTTC AGGGCAGACG GTCAAGGCTG TTGAAGTTCA GGCTAATGGA GGCAACGCCT GA
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Protein sequence | MKYIATSVVA MLLLSGCDNT QSNNSSPSET EVGVVTVKSQ PVSVVSELTG RTSAALSAEV RPQVGGIIQK RLFKEGDLVK AGQPLYQIDA ASYQAAWNEA RAALQQAQAL VKADCQKAQR YARLVKENGV SQQDADDAQS TCAQDKASVA AKKAALETAR INLDWTTVTA PISGRIGISS VTPGALVTAS QDTALTTIRG LDTMYVDLTR SSVDLLRLRK QSLATNSDTM SVSLILEDGT TYSEKGRLEL TEVAVDESTG SVTLRAIFPN PQQQLLPGMF VRARVDEGVM EDAILAPQQG VTRDAKGNAT ALVVNKDNKV EQRTLETGET YGDKWLVLNG LHSGDRLIVE GSAKVTSGQT VKAVEVQANG GNA
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