Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1793 |
Symbol | |
ID | 6969744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1710050 |
End bp | 1710802 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643385740 |
Product | major tail protein V |
Protein accession | YP_002270230 |
Protein GI | 209398584 |
COG category | [N] Cell motility |
COG ID | [COG5492] Bacterial surface proteins containing Ig-like domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.0821203 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACAC CAAATCCCCT TGAGCCGGTA AAAGGTGCCG GTACCACTCT GTGGGTTTAC AACGGCAAGG GTGATGCTTA TGCAAACCCG TTGTCAGACG ATGACTGGCA GCGACTGGCT AAGGTGAAGG ATCTGACGCC GGGCGAGATG ACGGCAGAAC CCTACGATGA TAACTACCTG GATGATGAAG ACGCGGACTG GACCGCGACC GGGCAGGGGC AGAAGTCTGC AGGAGATACC AGTTTTACGC TGGCCTGGAA ACCGGGAGAA GAAGGTCAGA AAGGGCTTAT AGGCTGGTTT GAAAGCGGGG ATGTGCGGGC CTATAAAATC CGTTTCCCAA ATGGCACGGT GGATGTGTTC CGTGGCTGGG TCAGCAGTAT CGGTAAGGCC GTGACGGCGA AAGAAGTGAT CACCCGCACG GTGAAAGTCA CTAACGTGGG CAAACCTTCC GTGGCGGAAG AACGCAGCGA AATTACGCCG GCCACTGCAA TTAAGGTGAC ACCGACATCC GGTACGGTGG CAAAAGGGAA AACAACCACC CTGACGGTTT CTTTTGAGCC GGAAAGTGCA ACCGACAAGA CGTTCAGAGC GGTTTCCGCC GATCCGTCGA AAGCCACCAT TAGTGTGAAA GATATGACAA TTACGGTAAA CGGCGTGGCG ACAGGTAAGG TGCAGATCCC TGTGGTGAGC GGAAATGGTC AGTTCGCCGC AGTGGCTGAA GTCACCGTTA CTGAAGCGGG CGCTGCAGGG TAA
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Protein sequence | MATPNPLEPV KGAGTTLWVY NGKGDAYANP LSDDDWQRLA KVKDLTPGEM TAEPYDDNYL DDEDADWTAT GQGQKSAGDT SFTLAWKPGE EGQKGLIGWF ESGDVRAYKI RFPNGTVDVF RGWVSSIGKA VTAKEVITRT VKVTNVGKPS VAEERSEITP ATAIKVTPTS GTVAKGKTTT LTVSFEPESA TDKTFRAVSA DPSKATISVK DMTITVNGVA TGKVQIPVVS GNGQFAAVAE VTVTEAGAAG
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