Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1591 |
Symbol | phoP |
ID | 6968523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 1548176 |
End bp | 1548847 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643385553 |
Product | DNA-binding transcriptional regulator PhoP |
Protein accession | YP_002270047 |
Protein GI | 209395806 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0000245208 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCGTAC TGGTTGTTGA AGACAATGCG TTGTTACGTC ACCACCTTAA AGTTCAGATT CAGGATGCTG GTCATCAGGT CGATGATGCA GAAGATGCCA AAGAAGCCGA TTATTATCTC AATGAACATT TACCGGATAT TGCGATTGTC GATCTCGGAT TGCCAGACGA GGACGGTCTG TCACTGATTT GCCGCTGGCG TAGCAATGAT GTTTCACTGC CGATTCTGGT ATTAACCGCC CGTGAAAGCT GGCAGGACAA AGTCGAAGTA TTAAGTGCCG GTGCTGATGA TTACGTGACT AAACCGTTTC ATATTGAAGA GGTGATGGCG CGAATGCAGG CATTAATGCG GCGTAATAGC GGCCTGGCTT CACAGGTCAT TTCGCTCCCC CCGTTTCAGG TTGATCTCTC TCGCCGTGAA TTATCTATTA ATGACGAAGT GATCAAACTG ACCGCGTTCG AATACACCAT TATGGAAACG TTGATACGCA ATAATGGCAA AGTGGTCAGC AAAGATTCGT TAATGCTACA ACTCTATCCG GATGCGGAGC TGCGGGAAAG CCATACCATT GATGTACTGA TGGGACGTCT GCGCAAAAAA ATTCAGGCAC AATATCCGCA AGAAGTGATT ACTACCGTTC GCGGCCAGGG CTATTTGTTC GAATTGCGCT GA
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Protein sequence | MRVLVVEDNA LLRHHLKVQI QDAGHQVDDA EDAKEADYYL NEHLPDIAIV DLGLPDEDGL SLICRWRSND VSLPILVLTA RESWQDKVEV LSAGADDYVT KPFHIEEVMA RMQALMRRNS GLASQVISLP PFQVDLSRRE LSINDEVIKL TAFEYTIMET LIRNNGKVVS KDSLMLQLYP DAELRESHTI DVLMGRLRKK IQAQYPQEVI TTVRGQGYLF ELR
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