Gene ECH74115_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1569 
Symbol 
ID6969029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1534309 
End bp1535430 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content54% 
IMG OID643385534 
Productcupin family protein 
Protein accessionYP_002270028 
Protein GI209395797 
COG category[S] Function unknown 
COG ID[COG2850] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.486119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00000357486 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAATACC AACTCACTCT TAACTGGCCC GATTTTCTTG AACGTCACTG GCAGAAACGC 
CCGGTGGTGT TAAAACGCGG CTTTAATAAT TTTATTGACC CGATCTCTCC AGACGAGTTG
GCGGGTCTGG CGATGGAAAG CGAAGTCGAC AGTCGACTGG TCAGTCACCA GGATGGAAAA
TGGCAGGTCA GCCACGGTCC GTTCGAAAGC TACGATCATC TCGGTGAAAC TAACTGGTCA
TTGTTAGTGC AAGCAGTGAA CCACTGGCAT GAGCCGACCG CCGCGCTGAT GCGACCGTTC
CGTGAACTAC CGGACTGGCG TATTGATGAT CTGATGATCT CTTTTTCTGT ACCTGGCGGC
GGCGTCGGCC CGCATCTCGA TCAGTACGAC GTGTTTATCA TTCAGGGTAC CGGACGTCGT
CGCTGGCGAG TGGGCGAGAA GCTGCAAATG AAACAGCACT GCCCACATCC GGATCTGTTA
CAGGTCGATC CGTTCGAAGC CATCATCGAT GAAGAGCTGG AGCCTGGCGA TATTCTTTAT
ATTCCGCCAG GATTCCCGCA TGAAGGCTAC GCGCTGGAAA ATGCGATGAA CTATTCCGTG
GGTTTTCGCG CGCCAAATAC GCGGGAATTA ATTAGCGGAT TTGCCGATTA TGTGCTGCAA
CGCGAACTGG GCGGCAACTA CTACAGCGAT CCTGATGTTC CACCTCGCGC TCATCCTGCG
GACGTTCTGC CGCAAGAGAT GGATAAACTG CGTGAGATGA TGCTCGAATT GATCAACCAG
CCGGAACACT TTAAGCAATG GTTTGGCGAG TTTATATCCC AGTCACGTCA TGAACTGGAT
ATCGCGCCGC CGGAGCCGCC TTATCAGCCA GATGAAATCT ACGATGCGCT GAAACAAGGT
GATGTGCTGG TGCGCCTGGG TGGTCTGCGC GTATTGCGCA TTGGCGACGA CGTGTATACC
AATGGTGAGA AGATCGATTC CCCGCACCGT CCGGCACTGG ATGCACTCGC CAGCAACATT
GCGCTGACTG CGGAGAATTT TGGCGATGCG CTGGAAGATC CGTCATTCCT CGCGATGCTC
GCGGCGCTGG TCAATAGCGG GTATTGGTTC TTCGAAGGGT AA
 
Protein sequence
MEYQLTLNWP DFLERHWQKR PVVLKRGFNN FIDPISPDEL AGLAMESEVD SRLVSHQDGK 
WQVSHGPFES YDHLGETNWS LLVQAVNHWH EPTAALMRPF RELPDWRIDD LMISFSVPGG
GVGPHLDQYD VFIIQGTGRR RWRVGEKLQM KQHCPHPDLL QVDPFEAIID EELEPGDILY
IPPGFPHEGY ALENAMNYSV GFRAPNTREL ISGFADYVLQ RELGGNYYSD PDVPPRAHPA
DVLPQEMDKL REMMLELINQ PEHFKQWFGE FISQSRHELD IAPPEPPYQP DEIYDALKQG
DVLVRLGGLR VLRIGDDVYT NGEKIDSPHR PALDALASNI ALTAENFGDA LEDPSFLAML
AALVNSGYWF FEG