| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1490 |
|---|
| Symbol | |
|---|
| ID | 6969214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 1470314 |
|---|
| End bp | 1470853 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643385461 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002269955 |
|---|
| Protein GI | 209398929 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3134] Predicted outer membrane lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.00309897 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAATAAAT CAATGTTGGC GGGTATCGGG ATTGGTGTCG CAGCTGCGCT TGGCGTAGCG
GCAGTGGCCA GTCTGAACGT GTTTGAACGT GGCCCGCAAT ACGCTCAGGT TGTTTCTGCA
ACCCCAATCA AGGAAACGGT TAAAACACCG CGTCAGGAGT GTCGCAACGT CACAGTGACC
CATCGTCGAC CGGTGCAGGA TGAACATCGC ATTACCGGGT CGGTGCTCGG CGCTGTTGCT
GGCGGCGTGA TAGGGCATCA GTTTGGTGGT GGTCGTGGTA AAGATGTCGC CACTGTTGTG
GGGGCGCTGG GTGGTGGATA TGCCGGTAAC CAGATCCAGG GCTCTCTCCA GGAAAGCGAT
ACTTACACGA CTACGCAACA GCGTTGTAAA ACGGTGTATG ACAAGTCAGA AAAAATGCTC
GGTTATGATG TGACCTATAA GATTGGCGAT CAGCAGGGCA AAATCCGCAT GGACCGCGAT
CCGGGTACGC AGATCCCGCT AGATAGTAAC GGGCAACTGA TTTTGAATAA CAAAGTATAA
|
|---|
| Protein sequence | MNKSMLAGIG IGVAAALGVA AVASLNVFER GPQYAQVVSA TPIKETVKTP RQECRNVTVT
HRRPVQDEHR ITGSVLGAVA GGVIGHQFGG GRGKDVATVV GALGGGYAGN QIQGSLQESD
TYTTTQQRCK TVYDKSEKML GYDVTYKIGD QQGKIRMDRD PGTQIPLDSN GQLILNNKV
|
|---|
| |