Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1475 |
Symbol | pabC |
ID | 6972144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1455980 |
End bp | 1456789 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643385446 |
Product | 4-amino-4-deoxychorismate lyase |
Protein accession | YP_002269940 |
Protein GI | 209396492 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000862113 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00000000000021335 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCTTAA TTAACGGTTA TAAGCAGGAA TCGCTGTCAG TAAGCGATCG GGCAACGCAG TTTGGTGATG GTTGTTTTAC CACCGCCAGA GTTATCGACG GTAAAGTCAG TTTGTTATCG GCGCATATCC AGCGACTACA GGATGCTTGT CAGCGGTTGA TGATTTCCTG TGACTTCTGG CCTCAGCTTG AACAAGAGAT GAAAACGCTG GCAGCAGAAC AGCAAAATGG TGTACTGAAA GTCGTGATCA GTCGCGGTAG TGGCGGGCGA GGGTACAGCA CATTGAACAG TGGACCGGCA ACGCGGATTC TCTCCGTTAC GGCTTATCCT GCACATTACG ACCGTTTGCG TAACGAAGGG ATCACGTTGG CGCTAAGCCC GGTGCGGCTG GGGCGCAATC CTCATCTTGC AGGTATTAAA CATCTTAATC GGCTTGAGCA AGTATTGATC CGCTCTCATC TTGAGCAGAC AAACGCTGAT GAGGCGCTGG TCCTTGACAG CGAAGGGGGG GTTACGGAAT GCTGTGCAGC TAATTTGTTC TGGCGGAAGG GCAACGTAGT TTATACGCCG CGACTGGATC AGGCAGGTGT TAACGGCATT ATGCGACAAT TCTGTATCCG TTTGCTGGCA CAATCCTCTT ATCAGCTTGT CGAAGTGCAA GCCTCTCTGG AAGAGGCGTT GCAGGCAGAT GAGATGGTTA TTTGTAATGC GTTAATGCCA GTGATGCCCG TACGTGCCTG TGGCGATGTC TCCTTTTCGT CAGCAACGTT ATATGAATAT TTAGCCCCAC TTTGTGAGCG CCCGAATTAG
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Protein sequence | MFLINGYKQE SLSVSDRATQ FGDGCFTTAR VIDGKVSLLS AHIQRLQDAC QRLMISCDFW PQLEQEMKTL AAEQQNGVLK VVISRGSGGR GYSTLNSGPA TRILSVTAYP AHYDRLRNEG ITLALSPVRL GRNPHLAGIK HLNRLEQVLI RSHLEQTNAD EALVLDSEGG VTECCAANLF WRKGNVVYTP RLDQAGVNGI MRQFCIRLLA QSSYQLVEVQ ASLEEALQAD EMVICNALMP VMPVRACGDV SFSSATLYEY LAPLCERPN
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