| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1048 |
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| Symbol | cydC |
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| ID | 6970623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 1061907 |
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| End bp | 1063628 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643385060 |
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| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
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| Protein accession | YP_002269559 |
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| Protein GI | 209398825 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00703817 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCTT TGCTACCCTA TCTGGCACTG TATAAACGTC ATAAATGGAT GTTAAGTCTT
GGTATTGTGC TGGCAATTGT GACGCTGCTC GCCAGTATCG GTCTGTTGAC ACTTTCCGGC
TGGTTCCTCT CGGCCTCAGC GGTTGCGGGG GTTGCCGGAC TGTACAGCTT CAACTATATG
CTACCCGCTG CGGGCGTGCG TGGTGCAGCA ATCACCCGTA CTGCCGGGCG TTATTTTGAA
CGTCTGGTAA GTCACGACGC GACTTTCCGC GTGTTGCAGC ATCTGCGCAT TTACACCTTC
AGCAAATTGT TGCCCCTCTC CCCTGCCGGA CTGGCGCGCT ATCGTCAGGG CGAATTGCTC
AACCGCGTGG TGGCGGATGT TGATACGCTC GATCATCTTT ACCTGCGCGT TATCTCGCCG
CTGGTGGGCG CTTTTGTGGT GATTATGGTG GTGACAATCG GGTTAAGTTT CCTTGATTCC
ACCCTCGCCT TTACGCTGGG CGGCATTATG TTACTGACGC TTTTCCTGAT GCCACCGCTG
TTTTATCGTG CGGGAAAAAG CACCGGGCAA AATCTGACTC ATCTTCGCGG ACAGTATCGC
CAACAACTGA CGGCCTGGCT GCAAGGGCAA GCTGAGCTGA CCATTTTTGG TGCCAGCGAT
CGTTATCGCA CGCAACTAGA GAATACAGAA ATTCAATGGC TGGAAGCGCA ACGCCGTCAA
TCTGAACTGA CCGCATTGTC GCAAGCGATA ATGCTGCTCA TTGGCGCGTT AGCGGTGATC
CTGATGCTGT GGATGGCGTC TGGCGGCGTT GGCGGCAATG CTCAACCCGG CGCGTTAATT
GCCCTGTTTG TCTTTTGCGC GTTAGCCGCG TTTGAAGCAC TGGCACCAGT AACGGGTGCA
TTTCAGCATC TGGGGCAAGT CATTGCCTCT GCCGTACGTA TCTCTGACTT AACGGATCAA
AAACCGGAGG TCACCTTCCC TGATACCCAA ACTCGTGTTG CCGATCGCGT TTCGCTGACA
TTACGGGATG TTCAGTTCAC TTATCCGGAG CAATCCCAAC AGGCACTTAA AGGGATTTCT
CTTCAGGTAA ACGCCGGGGA ACATATAGCG ATTCTCGGGC GAACCGGATG CGGCAAATCA
ACACTGTTAC AACTGCTGAC CCGCGCATGG GACCCGCAAC AGGGCGAGAT TTTGCTTAAC
GATAGCCCCA TAGCCAGCCT GAATGAAGCG GCTCTACGAC AGACCATCAG CGTTGTTCCT
CAGCGAGTGC ATCTGTTTAG CGCCACGCTG CGTGATAATC TGTTACTCGC CTCGCCTGGC
AGTAGTGATG AGGCTCTGGC GGTGATCTTA CGTCGCGTTG GTCTGGAGAA GCAGCTCGAG
GATGCAGGTC TCAACAGTTG GTTAGGTGAA GGCGGACGCC AGCTCTCCGG TGGTGAACTG
CGCCGTCTGG CTATCGCCCG TGCGCTGTTA CATGATGCGC CACTGGTGTT GCTGGATGAA
CCTACCGAAG GCTTAGATGC CACAACCGAA AGCCAGATCC TTGAATTGCT TGCAGAAATG
ATGCGTGAGA AAACGGTGTT AATGGTCACC CATCGACTTC GCGGACTCTC TCGTTTCCAA
CAAATAATAG TGATGGACAA CGGGCAAATT ATTGAGCAAG GTACTCACGC AGAACTGCTT
GCCAGACAGG GGCGTTATTA CCAGTTCAAG CAGGGTTTGT AA
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| Protein sequence | MRALLPYLAL YKRHKWMLSL GIVLAIVTLL ASIGLLTLSG WFLSASAVAG VAGLYSFNYM
LPAAGVRGAA ITRTAGRYFE RLVSHDATFR VLQHLRIYTF SKLLPLSPAG LARYRQGELL
NRVVADVDTL DHLYLRVISP LVGAFVVIMV VTIGLSFLDS TLAFTLGGIM LLTLFLMPPL
FYRAGKSTGQ NLTHLRGQYR QQLTAWLQGQ AELTIFGASD RYRTQLENTE IQWLEAQRRQ
SELTALSQAI MLLIGALAVI LMLWMASGGV GGNAQPGALI ALFVFCALAA FEALAPVTGA
FQHLGQVIAS AVRISDLTDQ KPEVTFPDTQ TRVADRVSLT LRDVQFTYPE QSQQALKGIS
LQVNAGEHIA ILGRTGCGKS TLLQLLTRAW DPQQGEILLN DSPIASLNEA ALRQTISVVP
QRVHLFSATL RDNLLLASPG SSDEALAVIL RRVGLEKQLE DAGLNSWLGE GGRQLSGGEL
RRLAIARALL HDAPLVLLDE PTEGLDATTE SQILELLAEM MREKTVLMVT HRLRGLSRFQ
QIIVMDNGQI IEQGTHAELL ARQGRYYQFK QGL
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