| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0815 |
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| Symbol | sdhA |
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| ID | 6969620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 835823 |
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| End bp | 837589 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643384840 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_002269346 |
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| Protein GI | 209399318 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.233209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGC CAGTCAGAGA ATTTGATGCA GTTGTGATTG GTGCCGGCGG CGCAGGTATG
CGCGCGGCGC TGCAAATTTC CCAGAGCGGC CAGACCTGTG CGCTGCTCTC TAAAGTCTTC
CCGACCCGTT CCCATACCGT TTCTGCGCAA GGCGGCATTA CCGTTGCGCT GGGTAATACC
CATGAAGATA ACTGGGAATG GCATATGTAC GACACCGTGA AAGGGTCGGA CTATATCGGT
GACCAGGACG CGATTGAATA TATGTGTAAA ACCGGGCCGG AAGCGATTCT GGAACTCGAA
CACATGGGCC TGCCGTTCTC GCGTCTCGAT GATGGTCGTA TCTATCAACG TCCGTTTGGC
GGTCAGTCGA AAAACTTCGG CGGCGAGCAG GCGGCACGCA CTGCGGCAGC GGCTGACCGT
ACCGGTCACG CACTGTTGCA CACGCTTTAT CAGCAGAACC TGAAAAACCA CACCACCATT
TTCTCCGAGT GGTATGCGCT GGATCTGGTG AAAAACCAGG ATGGCGCGGT GGTGGGTTGT
ACCGCACTGT GCATCGAAAC CGGTGAAGTG GTTTATTTTA AAGCCCGCGC TACCGTGCTG
GCGACTGGCG GAGCAGGGCG TATTTATCAG TCTACCACTA ACGCCCACAT TAACACCGGC
GACGGCGTCG GCATGGCTAT CCGCGCAGGC GTACCGGTGC AGGATATGGA AATGTGGCAA
TTCCACCCGA CCGGCATTGC CGGTGCGGGC GTACTGGTCA CCGAAGGTTG CCGTGGTGAA
GGCGGTTATC TGCTGAACAA ACATGGCGAA CGCTTTATGG AGCGTTATGC GCCGAACGCC
AAAGACCTGG CGGGCCGTGA TGTGGTGGCG CGTTCAATCA TGATTGAAAT CCGTGAAGGT
CGCGGCTGTG ATGGTCCGTG GGGGCCACAC GCGAAACTGA AACTCGATCA CCTGGGTAAA
GAAGTTCTCG AATCCCGTCT GCCGGGTATC CTGGAGCTTT CCCGTACCTT CGCTCACGTT
GATCCGGTGA AAGAGCCGAT TCCGGTTATC CCAACCTGTC ACTACATGAT GGGCGGTATT
CCGACCAAAG TTACCGGTCA GGCGCTGACT GTGAATGAGA AAGGCGAAGA TGTGGTTGTT
CCGGGGCTGT TCGCGGTAGG TGAAATTGCC TGCGTATCGG TACACGGTGC TAACCGTCTG
GGCGGCAACT CGCTGCTGGA CCTGGTGGTC TTTGGTCGCG CAGCGGGTCT GCATCTGCAA
GAGTCTATCG CCGAGCAGGG CGCATTGCGC GATGCCAGCG AGTCTGATGT TGAAGCATCT
TTGGATCGTC TGAACCGCTG GAACAATAAT CGTAACGGTG AAGATCCGGT GGCGATTCGT
AAAGCGCTGC AAGAATGTAT GCAGCATAAC TTCTCGGTCT TCCGTGAAGG TGATGCGATG
GCTAAAGGGC TTGAGCAGTT GAAAGTGATC CGCGAGCGTC TGAAAAATGC CCGTCTGGAT
GACACTTCCA GCGAGTTCAA CACCCAGCGC GTTGAGTGCC TGGAACTGGA TAACCTGATG
GAAACGGCGT ATGCAACGGC TGTTTCTGCC AACTTCCGTA CCGAAAGCCG TGGCGCACAT
AGCCGCTTCG ACTTCCCGGA TCGTGATGAT GAAAACTGGC TGTGCCACTC CCTGTATCTG
CCAGAGTCGG AATCCATGAC GCGCCGAAGC GTCAACATGG AACCGAAACT GCGCCCGGCA
TTCCCGCCGA AGATTCGTAC TTACTAA
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| Protein sequence | MKLPVREFDA VVIGAGGAGM RAALQISQSG QTCALLSKVF PTRSHTVSAQ GGITVALGNT
HEDNWEWHMY DTVKGSDYIG DQDAIEYMCK TGPEAILELE HMGLPFSRLD DGRIYQRPFG
GQSKNFGGEQ AARTAAAADR TGHALLHTLY QQNLKNHTTI FSEWYALDLV KNQDGAVVGC
TALCIETGEV VYFKARATVL ATGGAGRIYQ STTNAHINTG DGVGMAIRAG VPVQDMEMWQ
FHPTGIAGAG VLVTEGCRGE GGYLLNKHGE RFMERYAPNA KDLAGRDVVA RSIMIEIREG
RGCDGPWGPH AKLKLDHLGK EVLESRLPGI LELSRTFAHV DPVKEPIPVI PTCHYMMGGI
PTKVTGQALT VNEKGEDVVV PGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRAAGLHLQ
ESIAEQGALR DASESDVEAS LDRLNRWNNN RNGEDPVAIR KALQECMQHN FSVFREGDAM
AKGLEQLKVI RERLKNARLD DTSSEFNTQR VECLELDNLM ETAYATAVSA NFRTESRGAH
SRFDFPDRDD ENWLCHSLYL PESESMTRRS VNMEPKLRPA FPPKIRTY
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