Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0782 |
Symbol | seqA |
ID | 6967172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 796286 |
End bp | 796831 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643384809 |
Product | replication initiation regulator SeqA |
Protein accession | YP_002269315 |
Protein GI | 209396469 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3057] Negative regulator of replication initiationR |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000736728 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGA TTGAAGTTGA TGATGAACTC TACAGCTATA TTGCCAGCCA CACTAAGCAT ATCGGCGAGA GCGCATCCGA CATTTTACGG CGTATGTTGA AATTTTCCGC CGCATCACAG CCTGCTGCTC CGGTGACGAA AGAGGTTCGC GTTGCGTCAC CTGCTATCGT CGAAGCGAAG CCGATCAAAA CGATTAAAGA CAAGGTTCGC GCAATGCGTG AACTTCTGCT TTCGGATGAA TATGCAGAGC AAAAGCGAGC GGTCAATCGC TTTATGCTGC TGTTGTCTAC ACTATATTCT CTTGACGCCC AGGCGTTTGC CGAAGCAACG GAATCGTTGC ACGGTCGTAC ACGCGTTTAC TTTGCGGCAG ATGAACAAAC GCTGCTGAAA AATGGTAATC AGACCAAGCC GAAACATGTG CCAGGCACGC CGTATTGGGT GATCACCAAC ACCAACACCG GCCGTAAATG CAGCATGATC GAACACATCA TGCAGTCGAT GCAATTCCCG GCGGAATTGA TTGAGAAGGT TTGCGGAACT ATCTAA
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Protein sequence | MKTIEVDDEL YSYIASHTKH IGESASDILR RMLKFSAASQ PAAPVTKEVR VASPAIVEAK PIKTIKDKVR AMRELLLSDE YAEQKRAVNR FMLLLSTLYS LDAQAFAEAT ESLHGRTRVY FAADEQTLLK NGNQTKPKHV PGTPYWVITN TNTGRKCSMI EHIMQSMQFP AELIEKVCGT I
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