Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0729 |
Symbol | holA |
ID | 6969381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 755207 |
End bp | 756238 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643384763 |
Product | DNA polymerase III subunit delta |
Protein accession | YP_002269276 |
Protein GI | 209397273 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000331026 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.281474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCGGT TGTACCCGGA ACAACTCCGC GCGCAGCTCA ATGAAGGGCT GCGCGCGGCG TATCTTTTAC TTGGTAACGA TCCTCTGTTA TTGCAGGAAA GCCAGGACGC TGTTCGTCAG GTAGCTGCGG CACAAGGATT CGAAGAACAC CACACTTTTT CCATTGATCC CAACACTGAC TGGAATGCGA TCTTTTCGTT ATGCCAGGCC ATGAGTCTGT TTGCCAGTCG ACAAACGCTA TTGCTGTTGT TACCAGAAAA CGGACCAAAC GCGGCGATCA ATGAACAACT TCTCACACTC ACCGGACTTC TGCATGACGA CCTGCTGTTG ATCGTCCGCG GTAATAAATT AAGCAAAGCG CAAGAAAATG CCGCCTGGTT TACTGCTCTT GCGAATCGCA GCGTGCAGGT GACCTGTCAG ACACCGGAGC AGGCTCAGCT TCCCCGCTGG GTTGCTGCGC GCGCAAAACA GCTCAACTTA GAACTGGATG ACGCGGCGAA TCAGGTGCTC TGCTACTGTT ATGAAGGTAA CCTGCTGGCG CTGGCTCAGG CACTGGAGCG TTTATCGCTG CTCTGGCCAG ACGGCAAACT GACATTACCG CGCGTTGAAC AGGCGGTGAA TGATGCCGCG CATTTCACTC CTTTTCATTG GGTTGATGCT TTGTTGATGG GAAAAAGTAA GCGCGCATTG CATATTCTTC AGCAACTGCG TCTGGAAGGC AGCGAACCGG TTATTTTGTT GCGCACATTA CAACGTGAAC TCTTGTTACT GGTTAACCTG AAACGCCAGT CTGCCCATAC GCCACTGCGT GCGTTGTTTG ATAAGCATCG GGTATGGCAG AACCGCCGGG GCATGATGGG CGAGGCGTTA AATCGCTTAA GTCAGCCGCA GTTACGTCAG GCCGTGCAAC TCCTGACACG AACGGAACTC ACCCTCAAAC AAGATTACAG TCAGTCAGTG TGGGCAGAGT TGGAAGGGTT ATCTCTTCTG TTGTGCCATA AACCCCTGGC GGACGTATTT ATCGACGGTT GA
|
Protein sequence | MIRLYPEQLR AQLNEGLRAA YLLLGNDPLL LQESQDAVRQ VAAAQGFEEH HTFSIDPNTD WNAIFSLCQA MSLFASRQTL LLLLPENGPN AAINEQLLTL TGLLHDDLLL IVRGNKLSKA QENAAWFTAL ANRSVQVTCQ TPEQAQLPRW VAARAKQLNL ELDDAANQVL CYCYEGNLLA LAQALERLSL LWPDGKLTLP RVEQAVNDAA HFTPFHWVDA LLMGKSKRAL HILQQLRLEG SEPVILLRTL QRELLLLVNL KRQSAHTPLR ALFDKHRVWQ NRRGMMGEAL NRLSQPQLRQ AVQLLTRTEL TLKQDYSQSV WAELEGLSLL LCHKPLADVF IDG
|
| |