Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0689 |
Symbol | |
ID | 6971558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 721460 |
End bp | 722362 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643384725 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002269238 |
Protein GI | 209397013 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.555049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAATC TCTACGACTT GAAAAAGTTC GACTTAAATC TTCTTGTCAT ATTTGAGTGT ATTTACCAGC ATTTAAGCAT TAGCAAAGCT GCTGAATCAC TATATATCAC CCCATCAGCC GTGAGCCAGT CGTTACAACG CTTACGTGCG CAATTTAATG ACCCTTTATT CATTCGCTCA GGAAAAGGTA TCGCGCCGAC GACAACAGGG TTAAATCTGC ATCACCATCT TGAGAAAAAT CTCAGAGGCC TTGAACAAAC AATTAATATA GTCAATAAGT CCGAACTAAA GAAAAACTTT ATTATTCACG GCCCTCAGCT CATTTCTTGC TCTAATAATA GTATGCTGAT CCGCTGCCTA CGGCAAGATT CCTCTGTCGA GATTGAGTGC CATGATATCC TCATGTCAGC AGAGAATGCT GAAGAACTGT TGGTTCACCG CAAAGCCGAT CTGGTGATCA CCCAAATGCC AGTGATCAGC CGTTCCGTCA TTTGCATGCC ATTGCATACG ATTCGCAATA CTCTAATTTG TAGTAATAGG CATCCACGAA TTACTGACAA TAGCACTTAT GAACAAATTA TGGCAGAAGA GTTCACCCAA TTAATATCTA AATCAGCAGG GGTTGATGAT ATTCAAATGG AAATAGACGA GAGATTTATG AATCGCAAAA TTTCATTTCG TGGTTCCTCT TTGCTGACAA TCATTAATAG CATTGCAGTT ACAGATTTAC TGGGAATAGT CCCCTATGAA CTTTATAACT CCCACCGTGA CTTTCTTAAT TTAAAAGAGA TAAAACTAGA ACATCCGTTA CCTTCAATAA AGCTTTACAT TTCCTATAAT AAATCTTCTT TAAACAATCT GGTGTTCTCA CGATTTATTG ACCGTCTAAA TGAGTGTTTT TGA
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Protein sequence | MTNLYDLKKF DLNLLVIFEC IYQHLSISKA AESLYITPSA VSQSLQRLRA QFNDPLFIRS GKGIAPTTTG LNLHHHLEKN LRGLEQTINI VNKSELKKNF IIHGPQLISC SNNSMLIRCL RQDSSVEIEC HDILMSAENA EELLVHRKAD LVITQMPVIS RSVICMPLHT IRNTLICSNR HPRITDNSTY EQIMAEEFTQ LISKSAGVDD IQMEIDERFM NRKISFRGSS LLTIINSIAV TDLLGIVPYE LYNSHRDFLN LKEIKLEHPL PSIKLYISYN KSSLNNLVFS RFIDRLNECF
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